18 homologs were found in PanDaTox collection
for query gene RPD_1945 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007958  RPD_1945  peptidoglycan binding domain-containing protein  100 
 
 		 266 aa  520  1e-146  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0459891  normal  0.0921332 
 
 
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NC_007778  RPB_3514  peptidoglycan binding domain-containing protein  73.72 
 
 		 267 aa  358  7e-98  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0652587  normal  0.321018 
 
 
-
 
NC_011004  Rpal_2064  Peptidoglycan-binding domain 1 protein  62.4 
 
 		 233 aa  274  1.0000000000000001e-72  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
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NC_007925  RPC_1780  peptidoglycan binding domain-containing protein  51.32 
 
 		 237 aa  218  6e-56  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.0189708 
 
 
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NC_007964  Nham_2622  peptidoglycan binding domain-containing protein  46.27 
 
 		 201 aa  179  4.999999999999999e-44  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
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NC_009485  BBta_3046  hypothetical protein  46.22 
 
 		 231 aa  177  1e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007406  Nwi_2220  hypothetical protein  44.09 
 
 		 193 aa  148  7e-35  Nitrobacter winogradskyi Nb-255  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_0699  peptidoglycan binding domain-containing protein  28.51 
 
 		 250 aa  73.6  0.000000000003  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_0710  Peptidoglycan-binding domain 1 protein  28.94 
 
 		 250 aa  71.6  0.00000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.296001 
 
 
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NC_009720  Xaut_1407  peptidoglycan binding domain-containing protein  43.82 
 
 		 239 aa  70.1  0.00000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.295856  normal  1 
 
 
-
 
NC_010505  Mrad2831_4662  peptidoglycan binding domain-containing protein  27.27 
 
 		 241 aa  60.1  0.00000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.486604 
 
 
-
 
NC_010511  M446_1122  peptidoglycan binding domain-containing protein  45.76 
 
 		 279 aa  54.7  0.000002  Methylobacterium sp. 4-46  Bacteria  normal  0.429481  normal  0.843879 
 
 
-
 
NC_011894  Mnod_0713  Peptidoglycan-binding domain 1 protein  42.37 
 
 		 276 aa  49.3  0.00007  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.621682  n/a   
 
 
-
 
NC_011830  Dhaf_4849  spore cortex-lytic enzyme  32.5 
 
 		 228 aa  45.4  0.0009  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011025  MARTH_orf462  hypothetical lipoprotein  42.25 
 
 		 228 aa  45.1  0.001  Mycoplasma arthritidis 158L3-1  Bacteria  decreased coverage  0.0000000000141923  n/a   
 
 
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NC_009636  Smed_0147  peptidoglycan binding domain-containing protein  38.33 
 
 		 1226 aa  44.3  0.002  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.240041 
 
 
-
 
NC_009636  Smed_0618  peptidoglycan binding domain-containing protein  32.76 
 
 		 312 aa  43.9  0.003  Sinorhizobium medicae WSM419  Bacteria  normal  0.773916  normal  1 
 
 
-
 
NC_011989  Avi_1306  hypothetical protein  32.14 
 
 		 374 aa  42.4  0.008  Agrobacterium vitis S4  Bacteria  normal  0.340844  n/a   
 
 
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