More than 300 homologs were found in PanDaTox collection
for query gene Mnod_6788 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008786  Veis_4806  acyl-CoA dehydrogenase domain-containing protein  81.28 
 
 
390 aa  678    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0972672  normal  0.132645 
 
 
-
 
NC_010676  Bphyt_6603  acyl-CoA dehydrogenase domain protein  85.01 
 
 
387 aa  698    Burkholderia phytofirmans PsJN  Bacteria  normal  0.884829  normal  0.0708806 
 
 
-
 
NC_008782  Ajs_0118  acyl-CoA dehydrogenase domain-containing protein  80 
 
 
386 aa  658    Acidovorax sp. JS42  Bacteria  normal  normal  0.3812 
 
 
-
 
NC_009379  Pnuc_1388  acyl-CoA dehydrogenase domain-containing protein  78.42 
 
 
389 aa  642    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6654  acyl-CoA dehydrogenase domain-containing protein  83.46 
 
 
387 aa  667    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7297  Acyl-CoA dehydrogenase  77.11 
 
 
390 aa  635    Burkholderia sp. 383  Bacteria  normal  0.118142  normal  0.575396 
 
 
-
 
NC_010557  BamMC406_5974  acyl-CoA dehydrogenase domain-containing protein  86.02 
 
 
385 aa  672    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A1009  acyl-CoA dehydrogenase domain protein  80.62 
 
 
387 aa  677    Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0989  acyl-CoA dehydrogenase domain-containing protein  80.62 
 
 
387 aa  677    Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0583  acyl-CoA dehydrogenase-like  85 
 
 
387 aa  689    Polaromonas sp. JS666  Bacteria  normal  0.530732  normal 
 
 
-
 
NC_009720  Xaut_1346  acyl-CoA dehydrogenase domain-containing protein  90.7 
 
 
387 aa  730    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0136  acyl-CoA dehydrogenase domain protein  80 
 
 
386 aa  658    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2584  putative acyl-CoA dehydrogenase  85.27 
 
 
387 aa  701    Burkholderia xenovorans LB400  Bacteria  normal  0.289384  normal  0.276761 
 
 
-
 
NC_007953  Bxe_C0655  putative acyl-CoA dehydrogenase  82.03 
 
 
386 aa  652    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.936999 
 
 
-
 
NC_010002  Daci_0198  acyl-CoA dehydrogenase domain-containing protein  83.82 
 
 
388 aa  656    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0928  acyl-CoA dehydrogenase domain protein  80.62 
 
 
387 aa  677    Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.327846  normal 
 
 
-
 
NC_011205  SeD_A0960  acyl-CoA dehydrogenase domain-containing protein  80.1 
 
 
387 aa  673    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1312  acyl-CoA dehydrogenase domain protein  86.82 
 
 
387 aa  714    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5810  acyl-CoA dehydrogenase-like  83.72 
 
 
401 aa  670    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.120503  n/a   
 
 
-
 
NC_008781  Pnap_2142  acyl-CoA dehydrogenase domain-containing protein  86.05 
 
 
387 aa  696    Polaromonas naphthalenivorans CJ2  Bacteria  normal  decreased coverage  0.00458594 
 
 
-
 
NC_008392  Bamb_6270  acyl-CoA dehydrogenase domain-containing protein  85.75 
 
 
385 aa  673    Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6174  acyl-CoA dehydrogenase domain-containing protein  83.72 
 
 
401 aa  670    Burkholderia cenocepacia HI2424  Bacteria  normal  0.785501  normal 
 
 
-
 
NC_011894  Mnod_6788  acyl-CoA dehydrogenase domain protein  100 
 
 
387 aa  810    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6853  acyl-CoA dehydrogenase domain-containing protein  79.16 
 
 
388 aa  625  1e-178  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4635  acyl-CoA dehydrogenase  81.38 
 
 
386 aa  619  1e-176  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_52900  acyl-CoA dehydrogenase  81.38 
 
 
386 aa  619  1e-176  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.461273  normal 
 
 
-
 
NC_010501  PputW619_3046  acyl-CoA dehydrogenase domain-containing protein  77.26 
 
 
387 aa  616  1e-175  Pseudomonas putida W619  Bacteria  normal  0.0247719  normal 
 
 
-
 
NC_007005  Psyr_2176  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  79.79 
 
 
387 aa  614  9.999999999999999e-175  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.247864  normal 
 
 
-
 
NC_007348  Reut_B3542  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  74.35 
 
 
389 aa  595  1e-169  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_3899  acyl-CoA dehydrogenase  75.73 
 
 
389 aa  595  1e-169  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00207473  normal  0.36456 
 
 
-
 
NC_009485  BBta_6663  acyl-CoA dehydrogenase  67.28 
 
 
388 aa  567  1e-161  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.831215 
 
 
-
 
NC_011004  Rpal_1802  acyl-CoA dehydrogenase domain protein  66.41 
 
 
390 aa  553  1e-156  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.586412  n/a   
 
 
-
 
NC_007778  RPB_3935  Acyl-CoA dehydrogenase-like  66.23 
 
 
391 aa  548  1e-155  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.32455  normal 
 
 
-
 
NC_007958  RPD_3695  acyl-CoA dehydrogenase-like  65.71 
 
 
391 aa  543  1e-153  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.451593  normal 
 
 
-
 
NC_007925  RPC_4265  acyl-CoA dehydrogenase-like  65.55 
 
 
390 aa  538  9.999999999999999e-153  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0749  acyl-CoA dehydrogenase family protein  64.64 
 
 
386 aa  536  1e-151  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0799  acyl-CoA dehydrogenase family protein  64.64 
 
 
388 aa  535  1e-151  Brucella suis 1330  Bacteria  normal  0.666655  n/a   
 
 
-
 
NC_010505  Mrad2831_2852  acyl-CoA dehydrogenase domain-containing protein  64.21 
 
 
382 aa  525  1e-148  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.394252  normal 
 
 
-
 
NC_010511  M446_5230  acyl-CoA dehydrogenase domain-containing protein  65.96 
 
 
384 aa  527  1e-148  Methylobacterium sp. 4-46  Bacteria  normal  0.131509  normal  0.0497047 
 
 
-
 
NC_008048  Sala_1692  acyl-CoA dehydrogenase-like protein  65.37 
 
 
387 aa  525  1e-148  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2577  acyl-CoA dehydrogenase domain-containing protein  66.23 
 
 
427 aa  524  1e-147  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_1221  acyl-CoA dehydrogenase-like  64.75 
 
 
389 aa  520  1e-146  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.0080641  n/a   
 
 
-
 
NC_008148  Rxyl_2735  acyl-CoA dehydrogenase-like protein  66.75 
 
 
381 aa  513  1e-144  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5073  acyl-CoA dehydrogenase domain protein  62.86 
 
 
385 aa  506  9.999999999999999e-143  Conexibacter woesei DSM 14684  Bacteria  normal  0.275301  normal  0.195622 
 
 
-
 
NC_013757  Gobs_2783  acyl-CoA dehydrogenase domain protein  57.78 
 
 
394 aa  449  1e-125  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.720925  n/a   
 
 
-
 
NC_009952  Dshi_1058  acyl-CoA dehydrogenase domain protein  57.33 
 
 
396 aa  442  1e-123  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1284  putative acyl-CoA dehydrogenase  48.44 
 
 
388 aa  383  1e-105  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3756  acyl-CoA dehydrogenase domain-containing protein  49.35 
 
 
404 aa  379  1e-104  Mycobacterium sp. JLS  Bacteria  normal  0.8183  normal  0.282187 
 
 
-
 
NC_008705  Mkms_3817  acyl-CoA dehydrogenase domain-containing protein  49.35 
 
 
404 aa  379  1e-104  Mycobacterium sp. KMS  Bacteria  normal  normal  0.420794 
 
 
-
 
NC_008146  Mmcs_3744  acyl-CoA dehydrogenase-like protein  49.35 
 
 
404 aa  379  1e-104  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2442  acyl-CoA dehydrogenase domain-containing protein  48.83 
 
 
395 aa  372  1e-102  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.830058  normal 
 
 
-
 
NC_008726  Mvan_4210  acyl-CoA dehydrogenase domain-containing protein  47.79 
 
 
399 aa  370  1e-101  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0538412  normal 
 
 
-
 
NC_010338  Caul_3576  acyl-CoA dehydrogenase domain-containing protein  48.04 
 
 
387 aa  368  1e-101  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0216  Acyl-CoA dehydrogenase-like  49.49 
 
 
388 aa  359  4e-98  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.482345  normal 
 
 
-
 
NC_011004  Rpal_5033  acyl-CoA dehydrogenase domain protein  48.46 
 
 
388 aa  357  1.9999999999999998e-97  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4519  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  46.75 
 
 
388 aa  348  6e-95  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0612  acyl-CoA dehydrogenase-like  47.69 
 
 
388 aa  348  6e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.564384  normal 
 
 
-
 
NC_013922  Nmag_3454  acyl-CoA dehydrogenase domain protein  47.3 
 
 
403 aa  343  2.9999999999999997e-93  Natrialba magadii ATCC 43099  Archaea  normal  0.263858  n/a   
 
 
-
 
NC_009719  Plav_2684  acyl-CoA dehydrogenase domain-containing protein  46.49 
 
 
389 aa  343  2.9999999999999997e-93  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3566  putative acyl-CoA dehydrogenase  48.21 
 
 
388 aa  342  5e-93  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
CP001800  Ssol_0883  acyl-CoA dehydrogenase domain protein  45.38 
 
 
389 aa  342  5.999999999999999e-93  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_008786  Veis_1197  acyl-CoA dehydrogenase domain-containing protein  45.45 
 
 
387 aa  341  1e-92  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.344889  normal 
 
 
-
 
NC_010084  Bmul_1573  acyl-CoA dehydrogenase domain-containing protein  46.46 
 
 
388 aa  340  2e-92  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0397782 
 
 
-
 
NC_008752  Aave_0176  acyl-CoA dehydrogenase domain-containing protein  47.01 
 
 
387 aa  340  2.9999999999999998e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  0.393885  normal  0.0741669 
 
 
-
 
NC_009921  Franean1_1608  acyl-CoA dehydrogenase domain-containing protein  45.31 
 
 
388 aa  340  2.9999999999999998e-92  Frankia sp. EAN1pec  Bacteria  normal  0.0385936  normal 
 
 
-
 
NC_007509  Bcep18194_C7290  Acyl-CoA dehydrogenase  45.57 
 
 
388 aa  336  3.9999999999999995e-91  Burkholderia sp. 383  Bacteria  normal  normal  0.882993 
 
 
-
 
NC_010551  BamMC406_1586  acyl-CoA dehydrogenase domain-containing protein  45.93 
 
 
388 aa  335  7.999999999999999e-91  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0698291  normal  0.518401 
 
 
-
 
NC_008390  Bamb_1567  acyl-CoA dehydrogenase domain-containing protein  45.93 
 
 
388 aa  335  1e-90  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1641  acyl-CoA dehydrogenase domain-containing protein  45.93 
 
 
388 aa  333  3e-90  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.426767  normal  0.179373 
 
 
-
 
NC_008060  Bcen_1188  acyl-CoA dehydrogenase-like  45.67 
 
 
388 aa  333  5e-90  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.348961  n/a   
 
 
-
 
NC_008542  Bcen2424_1668  acyl-CoA dehydrogenase domain-containing protein  45.67 
 
 
388 aa  333  5e-90  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0975176  n/a   
 
 
-
 
NC_010002  Daci_3675  acyl-CoA dehydrogenase domain-containing protein  47.01 
 
 
387 aa  332  7.000000000000001e-90  Delftia acidovorans SPH-1  Bacteria  normal  0.29817  normal  0.111107 
 
 
-
 
NC_007510  Bcep18194_A4816  Acyl-CoA dehydrogenase  45.67 
 
 
388 aa  330  2e-89  Burkholderia sp. 383  Bacteria  normal  normal  0.405129 
 
 
-
 
NC_007511  Bcep18194_B2643  Acyl-CoA dehydrogenase  44.79 
 
 
388 aa  329  5.0000000000000004e-89  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4712  acyl-CoA dehydrogenase domain protein  47.49 
 
 
389 aa  328  8e-89  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_1218  acyl-CoA dehydrogenase domain-containing protein  42.71 
 
 
393 aa  328  1.0000000000000001e-88  Metallosphaera sedula DSM 5348  Archaea  normal  0.673164  normal 
 
 
-
 
NC_007974  Rmet_4458  acyl-CoA dehydrogenase-like protein  46.25 
 
 
390 aa  326  5e-88  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.0000540968  normal  0.0304373 
 
 
-
 
NC_007950  Bpro_5275  acyl-CoA dehydrogenase-like  44.9 
 
 
388 aa  321  9.999999999999999e-87  Polaromonas sp. JS666  Bacteria  normal  0.033492  normal 
 
 
-
 
NC_013922  Nmag_3134  acyl-CoA dehydrogenase domain protein  42.64 
 
 
391 aa  306  5.0000000000000004e-82  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
BN001301  ANIA_06761  acyl-CoA dehydrogenase, putative (AFU_orthologue; AFUA_7G06510)  42.11 
 
 
427 aa  302  8.000000000000001e-81  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0976683  normal  0.137881 
 
 
-
 
NC_013510  Tcur_2462  acyl-CoA dehydrogenase domain protein  41.82 
 
 
393 aa  296  4e-79  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00196391  n/a   
 
 
-
 
NC_013595  Sros_3995  putative acyl-CoA dehydrogenase  40.73 
 
 
393 aa  280  5e-74  Streptosporangium roseum DSM 43021  Bacteria  normal  0.188129  normal  0.128089 
 
 
-
 
NC_007953  Bxe_C0852  putative acyl-CoA dehydrogenase  38.93 
 
 
390 aa  279  6e-74  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.0725613 
 
 
-
 
NC_013922  Nmag_2124  acyl-CoA dehydrogenase domain protein  39.28 
 
 
388 aa  272  9e-72  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013743  Htur_0010  acyl-CoA dehydrogenase domain protein  37.91 
 
 
388 aa  265  8.999999999999999e-70  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013744  Htur_3800  acyl-CoA dehydrogenase domain protein  34.38 
 
 
397 aa  242  7e-63  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.0378428  n/a   
 
 
-
 
NC_007950  Bpro_5284  acyl-CoA dehydrogenase-like  36.1 
 
 
388 aa  240  4e-62  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3214  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
383 aa  238  9e-62  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0341  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
378 aa  236  5.0000000000000005e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.600199  normal 
 
 
-
 
NC_009675  Anae109_2163  acyl-CoA dehydrogenase domain-containing protein  35.54 
 
 
389 aa  236  7e-61  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.820192  normal  0.287496 
 
 
-
 
NC_008705  Mkms_3265  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
384 aa  231  1e-59  Mycobacterium sp. KMS  Bacteria  normal  0.0866653  normal 
 
 
-
 
NC_008146  Mmcs_3203  acyl-CoA dehydrogenase-like protein  37.47 
 
 
384 aa  231  1e-59  Mycobacterium sp. MCS  Bacteria  normal  0.499599  n/a   
 
 
-
 
NC_013441  Gbro_3827  acyl-CoA dehydrogenase domain protein  34.16 
 
 
394 aa  228  2e-58  Gordonia bronchialis DSM 43247  Bacteria  normal  0.893751  n/a   
 
 
-
 
NC_007953  Bxe_C0513  putative acyl-CoA dehydrogenase  35.66 
 
 
387 aa  225  1e-57  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1715  Acyl-CoA dehydrogenase-like  33.8 
 
 
379 aa  222  9.999999999999999e-57  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  35.93 
 
 
379 aa  220  3e-56  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4615  acyl-CoA dehydrogenase domain-containing protein  36.43 
 
 
384 aa  220  3.9999999999999997e-56  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0437237  normal 
 
 
-
 
NC_009338  Mflv_1881  acyl-CoA dehydrogenase domain-containing protein  34.52 
 
 
386 aa  219  7e-56  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0940618 
 
 
-
 
NC_014158  Tpau_2830  acyl-CoA dehydrogenase domain protein  34.92 
 
 
389 aa  217  2.9999999999999998e-55  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1381  Butyryl-CoA dehydrogenase  32.68 
 
 
379 aa  217  2.9999999999999998e-55  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
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