26 homologs were found in PanDaTox collection
for query gene Cag_0102 on replicon NC_007514
Organism: Chlorobium chlorochromatii CaD3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007514  Cag_0102  XRE family transcriptional regulator  100 
 
 
115 aa  235  1e-61  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.0467204  n/a   
 
 
-
 
NC_007512  Plut_1316  XRE family transcriptional regulator  71.96 
 
 
113 aa  159  2e-38  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_3780  XRE family transcriptional regulator  39.25 
 
 
122 aa  91.7  3e-18  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_0110  transcriptional regulator, XRE family  33.64 
 
 
115 aa  68.9  0.00000000002  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2265  helix-turn-helix domain-containing protein  32.73 
 
 
115 aa  67.8  0.00000000005  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0339  transcriptional regulator, XRE family  31.82 
 
 
115 aa  64.7  0.0000000004  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.852602 
 
 
-
 
NC_007912  Sde_0093  hypothetical protein  34.95 
 
 
122 aa  59.3  0.00000002  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2665  DNA-binding protein  32 
 
 
120 aa  56.2  0.0000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.292881  n/a   
 
 
-
 
NC_009654  Mmwyl1_0625  XRE family transcriptional regulator  32.69 
 
 
108 aa  51.6  0.000004  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.000000000512612 
 
 
-
 
NC_007973  Rmet_2159  hypothetical protein  30.21 
 
 
198 aa  50.8  0.000006  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_1468  transcriptional regulator, XRE family  37.18 
 
 
125 aa  50.8  0.000006  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000041852  normal 
 
 
-
 
NC_011901  Tgr7_0613  putative transcriptional regulator, XRE family  28 
 
 
123 aa  48.5  0.00003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2636  XRE family transcriptional regulator  32.26 
 
 
121 aa  46.6  0.0001  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000270139  n/a   
 
 
-
 
NC_013174  Jden_0752  transcriptional regulator, XRE family  35.37 
 
 
102 aa  46.6  0.0001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.596173  normal 
 
 
-
 
NC_008825  Mpe_A0025  putative DNA-binding protein  38.1 
 
 
81 aa  43.9  0.0007  Methylibium petroleiphilum PM1  Bacteria  normal  0.0532078  normal  0.345409 
 
 
-
 
NC_012918  GM21_2212  hypothetical protein  31.96 
 
 
97 aa  43.5  0.001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000000000389536 
 
 
-
 
NC_012912  Dd1591_1240  helix-turn-helix domain protein  30.43 
 
 
141 aa  42.7  0.002  Dickeya zeae Ech1591  Bacteria  normal  0.261297  n/a   
 
 
-
 
NC_012880  Dd703_2668  transcriptional regulator, XRE family  31.82 
 
 
164 aa  42.7  0.002  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2941  helix-turn-helix domain protein  28.17 
 
 
145 aa  41.6  0.003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1338  helix-turn-helix domain protein  28.17 
 
 
145 aa  41.2  0.004  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010815  Glov_3689  transcriptional regulator, XRE family  37.33 
 
 
117 aa  41.6  0.004  Geobacter lovleyi SZ  Bacteria  normal  0.18369  normal 
 
 
-
 
NC_006368  lpp2426  hypothetical protein  39.62 
 
 
75 aa  40.8  0.006  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_2873  hypothetical protein  33.33 
 
 
101 aa  40.8  0.007  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.305653  n/a   
 
 
-
 
NC_010002  Daci_0461  XRE family transcriptional regulator  34.85 
 
 
97 aa  40.4  0.008  Delftia acidovorans SPH-1  Bacteria  normal  0.171408  normal 
 
 
-
 
NC_007973  Rmet_1481  XRE family transcriptional regulator  34.85 
 
 
97 aa  40.4  0.008  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.817787 
 
 
-
 
NC_011060  Ppha_2228  transcriptional regulator, XRE family  28.41 
 
 
109 aa  40  0.01  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
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