| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1240 |
|---|
| Symbol | |
|---|
| ID | 8118633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 1406115 |
|---|
| End bp | 1406540 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644851635 |
|---|
| Product | helix-turn-helix domain protein |
|---|
| Protein accession | YP_003003583 |
|---|
| Protein GI | 251788862 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.261297 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG GTGAAATCAT CACCGAGCTT TGTCGGCGTA TAAAAGACGC GCGTATTCAG
CAGCGATTAT CCCAGGTGGA TCTGGCCGAA CGGGCCGGCC TCGGCATCGC CACCATCAAA
CGGGCGGAGA TGGGGGAATC GATCACCCTG AGCAGCCTGC TGGCGATTCT GCGCGGGTTG
AATCGTCTGC ATCAATTGGA AGGCGTGCTA TTTGATACCG AAGTTGAGAA TTTCAATGCG
CGACTTAATG GCGGGCAATC CCGTACGCCG TTACGCATTC GTAAGAAAAA TACCGACGCG
CCGGCTCCCG TCGCCGCAGC GGAATCGATG CCTAAGCCTG TCGCCAGCGC CCTTGACTGG
TATGTTTCCG CGGCTGAAAA CAATTTAATT TGGTCCTGGC CGGACAACGA AAAAAAACCT
TCCTGA
|
|---|
| Protein sequence | MSEGEIITEL CRRIKDARIQ QRLSQVDLAE RAGLGIATIK RAEMGESITL SSLLAILRGL
NRLHQLEGVL FDTEVENFNA RLNGGQSRTP LRIRKKNTDA PAPVAAAESM PKPVASALDW
YVSAAENNLI WSWPDNEKKP S
|
|---|
| |