Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_1468 |
Symbol | |
ID | 6458585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 1606207 |
End bp | 1606584 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642725457 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002016135 |
Protein GI | 194334275 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000041852 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCATG AAAAAGATTT TTCGCTCGCA ACATGCGATC AGATTGAGGC TGCGCTGTGC AGGCAGCTTG AACGGATCAG GCTTTCGCGA AATATGACGC AGAAGCAGCT TGCTCTTGAG GCTGGTGTTT CATTGAGGAC TCTTGGCCGC CTTGAGAAAG GGCTTGGTGT TTCTTTTGAA ACGTTTATTC GTGTTATCAA GGCGCTTGGC ATGCAGCAGC GTCTGGAAGC ACTGTTGCCT GATGCTGAGG TAAGGCCATT CGAGCGGATA GGCAGTAGTG GCGCAGAGCG CAAGCGAGCC CGTCCGTCGA AGCACGTTCT TCCTCAAGGG TCCGGCGCCT GGTCATGGGG AGACGGGGAG GGCGATGGCG ATGTATGA
|
Protein sequence | MSHEKDFSLA TCDQIEAALC RQLERIRLSR NMTQKQLALE AGVSLRTLGR LEKGLGVSFE TFIRVIKALG MQQRLEALLP DAEVRPFERI GSSGAERKRA RPSKHVLPQG SGAWSWGDGE GDGDV
|
| |