Gene Paes_1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1468 
Symbol 
ID6458585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1606207 
End bp1606584 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content55% 
IMG OID642725457 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002016135 
Protein GI194334275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000041852 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATG AAAAAGATTT TTCGCTCGCA ACATGCGATC AGATTGAGGC TGCGCTGTGC 
AGGCAGCTTG AACGGATCAG GCTTTCGCGA AATATGACGC AGAAGCAGCT TGCTCTTGAG
GCTGGTGTTT CATTGAGGAC TCTTGGCCGC CTTGAGAAAG GGCTTGGTGT TTCTTTTGAA
ACGTTTATTC GTGTTATCAA GGCGCTTGGC ATGCAGCAGC GTCTGGAAGC ACTGTTGCCT
GATGCTGAGG TAAGGCCATT CGAGCGGATA GGCAGTAGTG GCGCAGAGCG CAAGCGAGCC
CGTCCGTCGA AGCACGTTCT TCCTCAAGGG TCCGGCGCCT GGTCATGGGG AGACGGGGAG
GGCGATGGCG ATGTATGA
 
Protein sequence
MSHEKDFSLA TCDQIEAALC RQLERIRLSR NMTQKQLALE AGVSLRTLGR LEKGLGVSFE 
TFIRVIKALG MQQRLEALLP DAEVRPFERI GSSGAERKRA RPSKHVLPQG SGAWSWGDGE
GDGDV