18 homologs were found in PanDaTox collection
for query gene CPS_4776 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_4776  glycosy hydrolase family protein  100 
 
 
606 aa  1263    Colwellia psychrerythraea 34H  Bacteria  normal  0.520076  n/a   
 
 
-
 
NC_008255  CHU_0961  beta-glycosidase-like protein  35.14 
 
 
1452 aa  329  8e-89  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.496478  normal 
 
 
-
 
NC_009783  VIBHAR_03428  hypothetical protein  32.87 
 
 
579 aa  317  3e-85  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002581  glucosamine-link cellobiase  33.56 
 
 
579 aa  315  1.9999999999999998e-84  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_0426  glycoside hydrolase family protein  34.12 
 
 
613 aa  313  5.999999999999999e-84  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0129037 
 
 
-
 
NC_011312  VSAL_I2581  putative chitobiase (exoglucosidase)  34.26 
 
 
575 aa  312  9e-84  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0843  glycoside hydrolase family 9  33.51 
 
 
559 aa  307  4.0000000000000004e-82  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_009457  VC0395_A0144  endoglucanase-related protein  33.51 
 
 
574 aa  306  8.000000000000001e-82  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5748  glycoside hydrolase family 9  32.85 
 
 
613 aa  294  3e-78  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.843409  normal  0.419471 
 
 
-
 
NC_013501  Rmar_0525  glycoside hydrolase family 9  32.54 
 
 
609 aa  270  5.9999999999999995e-71  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2621  glycoside hydrolase family 9 domain protein Ig domain protein  23.53 
 
 
833 aa  57.4  0.0000007  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0624  glycoside hydrolase family protein  24.18 
 
 
1601 aa  53.1  0.00002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1515  glycoside hydrolase family 9  26.02 
 
 
1100 aa  49.3  0.0002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6043  Terpenoid cylase/protein prenyltransferase- domain-containing protein  27.43 
 
 
622 aa  46.2  0.002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.642384  normal 
 
 
-
 
NC_011898  Ccel_2226  glycoside hydrolase family 9  22.1 
 
 
591 aa  45.8  0.002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0731  glycoside hydrolase family 9  25 
 
 
725 aa  45.1  0.004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0675  Cellulase  25.71 
 
 
1076 aa  44.7  0.005  Pedobacter heparinus DSM 2366  Bacteria  normal  0.379443  normal 
 
 
-
 
NC_009012  Cthe_2761  glycoside hydrolase family protein  50 
 
 
707 aa  43.9  0.008  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.00000261631  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>