| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5748 |
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| Symbol | |
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| ID | 8361928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7312347 |
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| End bp | 7314188 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644967889 |
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| Product | glycoside hydrolase family 9 |
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| Protein accession | YP_003125370 |
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| Protein GI | 256424717 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.843409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.419471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCTT TTAGTACCCT GGTGCTCTTC ATTGCACTAT TATTCCCGGG CATATCCAAA
GCCCAGTCTA CCAAAATCGT TACAAACCAC ATCGGTTATG AATTCAGTAA ATCCAAACGC
GCTGTACTGC TGGCGGAAAC TAAGGTCAGC GTTGGCAACG TAGACCTCAT CGACGCCTCC
AGCGGACGAA AAGTCTACTC CGCAAAAGCC GTATACAGTG GTCCGGTAGA CCAGTGGAAA
CACTGGCAGT TCTGGACAAT TGACTTCAGC GGCTACACTA CCGCCGGTAC TTATTTTCTC
AGTGCCAGCG TGGCCGGTCA GTCCGTACGC TCCTACCCTT TTACCATCGG AAAGAACGTA
CTGGAACAGG CGACCATCTC CGATGTCGTC TATTATTTCA AAGGACAGCG TTGTACCGGC
CTTTTCGACC AGGCGGACCG TCACCTACAC CTGGCCGGAA TGCCGTCTGA CACCATCGAC
GCACATGGTG GCTGGTACGA TGCAACGGGC GATTATGGTA AACACCTGTC GCACCTCTCC
TTTTCATCTT ATTTCAATCC GCAACAGGTG TCACTCACCG TCTGGAGTCT GCTGAAGACA
TACGAGCAAC TGAAAAGTAA ACCGGGTACG GACTATCGTC AGTATATCAG ACGCGTACTC
GATGAAGCCA TGTTCGGCGC CGATTATCTC GTCAGACTGA AAGCGCCCAA TGCTTCTTTC
TATCGCTCCG TTTCTGCACC TGGTCCGGGT AAACTGGCCA AAGACCGCAC AATCCGTCCG
GAGGACAAAG GCTATCGTAT CAAACAGTCA AAAGACCAGT CCTTCGGTAG TGGCAGCGGG
ACCTCCAGCG AAATGAACAA CTGGCGAAGC TACCAGTCCA GCTACCGTTC AGGCGCGGGC
CTATCCATCG CTGCATTAGC GATTGCTTCT ACTTATGATA CTTCCGGAGA GTACAGCAAT
AAAGACTACC TGAAAACAGC AGAAGACGCC TTCGCCTTCC TGGAAAAGGA AAATCCACAG
ATGACGAATG ACGGAAAAGA AAATATCGTA GATGATTATT GCGCACTCAG CGCCGCCACT
GAACTCTACA AAGCAACACA CAAAGACATT TATCTGCAGG CAGCCATCAA ACGCGCCAAA
CAGTTAAAAG ACCGCCTCAT CAGCAGTGGT AAATACCAGC ACTATTTCCG GGCAGATGAC
AAAGACAGAC CTTTCTTTCA TCCTTCTGAT GCAGGCTTGC CGGTCGTTAG TCTGCTGAAC
TTCTATCCAC TGGCGCCGGC TGCATTGCAA ACGGAAATCA AGGCGACAGT CAGACAATAC
ATGCAATATG AACTCGCTAT CACTAAAGAA GTGAACAATC CCTTCGGTTA TAGTCGTCAG
TATACTGAAG ACACTGCCGG TATCAGGAAA GCGACCTTCT TCTTCCCACA CGGTAGTGAA
GCATCTCCAT GGTGGCAGGG AGAGAACGCC AGACTGGGTT CACAGGCAAC CGCAGCAAGA
ATGACGGCAC ACTTGTTTAA AGCAGATAAA CCTTTTCACG ACAGCCTTGA AAATTTTGCG
CTCGATCAGC TGAACTGGAT ACTGGGACTC AATCCTTTTG ATGCCTGTAT GTTACAGGGC
GCCGGACATA ACAATCCGGC ATACGGCTTC TTCGGCACCT TTGAATACAC CAATGCACCT
GGTGGCATTG TGAATGGAAT TACCTCCGGT CTGGAGAATG ACAACGATAT TGACTTTAAT
CTCTCTTATG CCGTTACAAA GAAAGACTAT GACTGGCGCT GGGCAGAACA ATGGCTGCCA
CACGCCGCAT GGTACCTGCT GGCGGTAGCG ATCAATGAAT AA
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| Protein sequence | MRSFSTLVLF IALLFPGISK AQSTKIVTNH IGYEFSKSKR AVLLAETKVS VGNVDLIDAS
SGRKVYSAKA VYSGPVDQWK HWQFWTIDFS GYTTAGTYFL SASVAGQSVR SYPFTIGKNV
LEQATISDVV YYFKGQRCTG LFDQADRHLH LAGMPSDTID AHGGWYDATG DYGKHLSHLS
FSSYFNPQQV SLTVWSLLKT YEQLKSKPGT DYRQYIRRVL DEAMFGADYL VRLKAPNASF
YRSVSAPGPG KLAKDRTIRP EDKGYRIKQS KDQSFGSGSG TSSEMNNWRS YQSSYRSGAG
LSIAALAIAS TYDTSGEYSN KDYLKTAEDA FAFLEKENPQ MTNDGKENIV DDYCALSAAT
ELYKATHKDI YLQAAIKRAK QLKDRLISSG KYQHYFRADD KDRPFFHPSD AGLPVVSLLN
FYPLAPAALQ TEIKATVRQY MQYELAITKE VNNPFGYSRQ YTEDTAGIRK ATFFFPHGSE
ASPWWQGENA RLGSQATAAR MTAHLFKADK PFHDSLENFA LDQLNWILGL NPFDACMLQG
AGHNNPAYGF FGTFEYTNAP GGIVNGITSG LENDNDIDFN LSYAVTKKDY DWRWAEQWLP
HAAWYLLAVA INE
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