| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0624 |
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| Symbol | |
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| ID | 4808226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 765032 |
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| End bp | 769837 |
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| Gene Length | 4806 bp |
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| Protein Length | 1601 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640106038 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001037052 |
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| Protein GI | 125973142 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA GAAGATTATC GCTACTTTTG GTACTTGCCA TAATGTTTAC GATGGTCGTT
CCACAGATAT CTGCAAGTGC CGAAACAGTT GCTCCTGAAG GCTACAGGAA GCTTTTGGAT
GTACAAATTT TCAAGGATTC GCCTGTAGTC GGATGGTCAG GAAGCGGTAT GGGCGAGCTT
GAAACTATCG GCGATACCCT TCCGGTTGAT ACCACAGTTA CATATAACGG TTTGCCGACT
TTAAGACTGA ATGTCCAGAC AACCGTTCAG TCAGGATGGT GGATTTCTCT TCTTACATTA
AGAGGATGGA ACACCCATGA CCTTTCCCAG TATGTCGAAA ACGGTTATCT TGAGTTTGAC
ATCAAGGGTA AGGAAGGCGG AGAAGACTTT GTTATTGGTT TCAGGGACAA GGTTTATGAA
CGCGTTTACG GACTTGAAAT TGATGTTACC ACAGTAATAT CAAATTATGT AACGGTAACT
ACGGACTGGC AGCATGTTAA GATTCCTTTG AGAGACCTGA TGAAGATTAA TAACGGATTT
GATCCTTCAT CAGTTACATG CCTGGTGTTC TCAAAAAGAT ATGCAGATCC GTTTACAGTA
TGGTTCAGTG ATATAAAGAT TACATCAGAA GACAATGAAA AGTCCGCTCC TGCAATCAAG
GTAAACCAGC TTGGCTTTAT TCCTGAAGCT GAAAAATACG CTTTGGTTAC AGGTTTTGCA
GAAGAGCTCG CAGTATCGGA AGGTGACGAA TTTGCCGTTA TAAATGCTGC GGACAATTCT
GTTGCTTATA CCGGAAAATT AACTCTTGTA ACAGAATATG AACCTCTTGA TTCCGGAGAA
AAAATACTTA AGGCAGATTT CAGCGACTTG ACTGTACCTG GCAAATACTA CATTAGTATT
GAAGGTCTTG ACAATTCACC CAAGTTTGAA ATCGGTGAAG GTATTTACGG TCCACTGGTT
GTTGACGCTG CAAGATATTT CTATTATCAG CGTCAGGGTA TAGAACTTGA AGAGCCTTAT
GCGCAGGGAT ATCCCCGCAA GGACGTTACT CCTCAGGACG CATATGCTGT ATTTGCATCC
GGAAAGAAGG ATCCGATTGA CATAACAAAG GGTTGGTATG ACGCAGGAGA CTTCGGTAAG
TATGTAAATG CCGGAGCAAC CGGTGTTTCC GATTTGTTCT GGGCATATGA AATGTTCCCT
TCCCAGTTTG TTGACGGTCA GTTCAATATT CCTGAAAGCG GAAACGGTGT ACCGGACATC
CTTGACGAAG CTCGCTGGGA GCTTGAATGG ATGCTGAAAA TGCAGGACAA AGAAAGCGGA
GGATTCTATC CCAGAGTTCA ATCTGACAAT GACGAAAACA TAAAATCAAG AATAATCAGG
GATCAGAACG GCTGTACCAC TGATGATACT GCATGTGCCG CCGGAATACT TGCTCATGCA
TACTTGATTT ACAAGGATAT TGACCCTGAT TTTGCACAAG AGTGCCTGGA TGCGGCAATA
AATGCATGGA AATTCCTTGA AAAGAATCCT GAAAACATTG TTTCACCTCC GGGTCCATAC
AACGTATATG ACGACAGCGG AGACAGACTC TGGGCTGCAG CTTCGCTGTA CAGAGCTACC
GGTGAAGAGG TTTATCATAC ATACTTTAAA CAAAACTACA AATCTTTTGC ACAAAAGTTC
GAAAGCCCGA CTGCATATGC TCATACATGG GGTGATATGT GGCTTACGGC ATTCCTTTCG
TATTTGAAAG CTGAAAACAA GGATCAGGAA GTTGTAGACT GGATTGATAC AGAGTTTGGA
ATCTGGCTTG AAAACATACT CACAAGATAT GAGAACAATC CATGGAAGAA TGCAATTGTT
CCCGGAAACT ACTTCTGGGG AATCAACATG CAGGTTATGA ATGTTCCGAT GGATGCTATC
ATAGGTTCAC AGCTTCTTGG AAAATACAGT GACAGAATAG AAAAATTAGG TTTTGGTTCA
CTTAACTGGC TGCTTGGTAC AAATCCGCTT CGCTTCAGCT TTGTATCAGG ATATGGAGAG
GATTCTGTAA AAGGAGTATT CAGCAATATT TACAATACGG ACGGCAAGCA GGGAATTCCG
AAAGGATACA TGCCTGGTGG ACCAAATGCT TATGAAGGTG CAGGCCTGTC AAGGTTTGCA
GCAAAATGCT ACACCAGAAG TACCGGTGAC TGGGTAGCCA ACGAACATAC AGTATATTGG
AACTCAGCTT TGGTATTTAT GGCTGCTTTT GCAAACCAGG GTTCAGAGGT TAATCCGGGA
CCTGCGCCGG AACCGGGAGT AACTCCGAAT CCTACAGAAC CTGCAAAAGT GGTTGACATC
AGGATAGATA CTTCTGCTGA AAGAAAGCCA ATCAGCCCGT ATATATACGG AAGCAATCAG
GAACTTGATG CAACAGTTAC TGCAAAGAGG TTCGGCGGAA ACAGAACTAC AGGATACAAC
TGGGAAAACA ACTTCTCAAA TGCAGGAAGT GACTGGCTGC ATTACAGTGA TACATACCTT
TTGGAGGACG GCGGAGTACC TAAGGGAGAG TGGAGTACAC CTGCTTCTGT AGTTACCACG
TTCCATGACA AGGCACTTAG CAAAAATGTT CCTTACACAC TTATCACTCT TCAGGCAGCA
GGTTATGTTT CCGCAGACGG AAACGGACCG GTTTCCCAGG AAGAAACTGC ACCGTCTTCA
AGATGGAAGG AAGTTAAGTT TGAAAAGGGA GCACCTTTCT CACTTACACC GGACACAGAA
GATGATTATG TTTACATGGA TGAGTTTGTA AACTATCTTG TAAACAAATA CGGAAATGCA
TCCACACCTA CAGGAATAAA GGGTTATTCA ATAGATAACG AGCCGGCATT GTGGAGTCAT
ACTCATCCGA GAATTCATCC GGACAATGTA ACTGCCAAAG AGCTTATTGA AAAATCTGTA
GCTCTTTCCA AGGCGGTTAA AAAGGTAGAT CCATATGCAG AAATATTCGG ACCTGCTTTG
TACGGATTTG CCGCATATGA GACACTTCAG TCAGCTCCTG ACTGGGGAAC TGAAGGAGAA
GGATACAGGT GGTTTATAGA TTATTACCTC GATAAGATGA AAAAGGCTTC TGATGAAGAA
GGAAAGAGAC TTTTGGACGT ACTTGACGTA CACTGGTATC CGGAAGCCAG GGGCGGCGGT
GAAAGAATAT GCTTTGGAGC CGATCCAAGA AATATTGAGA CAAACAAAGC AAGATTGCAG
GCGCCCAGAA CATTGTGGGA TCCTACATAT ATTGAAGACA GCTGGATAGG ACAATGGAAG
AAGGATTTCC TCCCGATATT ACCTAATCTT TTGGATTCCA TTGAAAAATA TTATCCGGGA
ACGAAGCTTG CTATAACTGA ATATGACTAT GGCGGAGGAA ATCATATTAC AGGCGGTATT
GCTCAAGCCG ATGTTCTTGG TATATTCGGT AAATACGGTG TTTACCTTGC AACATTCTGG
GGAGATGCAA GCAATAACTA TACTGAGGCC GGTATAAACC TTTATACCAA CTACGACGGC
AAAGGCGGCA AATTTGGAGA TACATCCGTA AAATGTGAAA CGTCCGACAT AGAAGTAAGC
TCTGCTTATG CATCCATTGT CGGTGAAGAT GACAGCAAAC TCCATATCAT TCTTTTGAAC
AAGAACTATG ACCAGCCGAC GACATTCAAT TTCTCAATTG ACAGCAGCAA GAACTACACA
ATAGGAAATG TATGGGCATT TGACAGAGGA AGCTCCAATA TTACTCAAAG AACTCCTATA
GTGAACATAA AGGACAATAC CTTCACATAT ACAGTACCGG CTTTGACAGC GTGCCATATT
GTGCTTGAAG CTGCGGAGCC CGTAGTGTAC GGAGACTTGA ACAATGACTC TAAAGTAAAC
GCAGTAGACA TTATGATGCT CAAACGATAT ATTCTCGGAA TAATAGATAA TATAAATCTG
ACAGCAGCTG ACATTTATTT TGACGGTGTT GTAAATTCAA GTGACTATAA TATAATGAAG
AGATATTTGT TAAAGGCAAT AGAAGATATT CCTTATGTTC CGGAAAACCA GGCACCTAAA
GCAATATTTA CTTTCTCGCC CGAAGATCCG GTTACTGACG AGAATGTAGT GTTCAATGCA
TCAAATTCAA TAGATGAAGA CGGAACAATT GCCTATTATG TATGGGATTT CGGTGACGGA
TATGAAGGAA CTTCAACAAC ACCGACTATT ACCTATAAGT ATAAAAACCC CGGAACATAC
AAAGTAAAAC TGATTGTTAC AGACAACCAG GGGGCTTCAA GTTCGTTTAC AGCTACCATA
AAAGTAACCT CAGCTACCGG GGACAATTCC AAATTCAACT TTGAAGACGG CACGCTGGGA
GGATTTACAA CATCCGGAAC AAATGCTACG GGTGTTGTTG TGAACACTAC TGAAAAAGCA
TTCAAAGGCG AAAGAGGTCT TAAATGGACT GTAACAAGCG AAGGAGAAGG AACTGCAGAA
TTGAAACTTG ACGGAGGTAC TATTGTAGTT CCCGGTACCA CTATGACGTT TAGAATCTGG
ATACCTTCCG GTGCGCCTAT TGCTGCCATC CAGCCGTATA TTATGCCTCA TACACCTGAT
TGGTCGGAAG TCCTCTGGAA TTCGACATGG AAAGGATACA CCATGGTGAA GACCGATGAC
TGGAATGAAA TTACCCTGAC ACTGCCGGAA GACGTGGATC CGACTTGGCC GCAGCAGATG
GGTATACAGG TACAGACCAT AGATGAAGGT GAATTCACTA TCTATGTAGA TGCTATTGAC
TGGTAA
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| Protein sequence | MAKRRLSLLL VLAIMFTMVV PQISASAETV APEGYRKLLD VQIFKDSPVV GWSGSGMGEL
ETIGDTLPVD TTVTYNGLPT LRLNVQTTVQ SGWWISLLTL RGWNTHDLSQ YVENGYLEFD
IKGKEGGEDF VIGFRDKVYE RVYGLEIDVT TVISNYVTVT TDWQHVKIPL RDLMKINNGF
DPSSVTCLVF SKRYADPFTV WFSDIKITSE DNEKSAPAIK VNQLGFIPEA EKYALVTGFA
EELAVSEGDE FAVINAADNS VAYTGKLTLV TEYEPLDSGE KILKADFSDL TVPGKYYISI
EGLDNSPKFE IGEGIYGPLV VDAARYFYYQ RQGIELEEPY AQGYPRKDVT PQDAYAVFAS
GKKDPIDITK GWYDAGDFGK YVNAGATGVS DLFWAYEMFP SQFVDGQFNI PESGNGVPDI
LDEARWELEW MLKMQDKESG GFYPRVQSDN DENIKSRIIR DQNGCTTDDT ACAAGILAHA
YLIYKDIDPD FAQECLDAAI NAWKFLEKNP ENIVSPPGPY NVYDDSGDRL WAAASLYRAT
GEEVYHTYFK QNYKSFAQKF ESPTAYAHTW GDMWLTAFLS YLKAENKDQE VVDWIDTEFG
IWLENILTRY ENNPWKNAIV PGNYFWGINM QVMNVPMDAI IGSQLLGKYS DRIEKLGFGS
LNWLLGTNPL RFSFVSGYGE DSVKGVFSNI YNTDGKQGIP KGYMPGGPNA YEGAGLSRFA
AKCYTRSTGD WVANEHTVYW NSALVFMAAF ANQGSEVNPG PAPEPGVTPN PTEPAKVVDI
RIDTSAERKP ISPYIYGSNQ ELDATVTAKR FGGNRTTGYN WENNFSNAGS DWLHYSDTYL
LEDGGVPKGE WSTPASVVTT FHDKALSKNV PYTLITLQAA GYVSADGNGP VSQEETAPSS
RWKEVKFEKG APFSLTPDTE DDYVYMDEFV NYLVNKYGNA STPTGIKGYS IDNEPALWSH
THPRIHPDNV TAKELIEKSV ALSKAVKKVD PYAEIFGPAL YGFAAYETLQ SAPDWGTEGE
GYRWFIDYYL DKMKKASDEE GKRLLDVLDV HWYPEARGGG ERICFGADPR NIETNKARLQ
APRTLWDPTY IEDSWIGQWK KDFLPILPNL LDSIEKYYPG TKLAITEYDY GGGNHITGGI
AQADVLGIFG KYGVYLATFW GDASNNYTEA GINLYTNYDG KGGKFGDTSV KCETSDIEVS
SAYASIVGED DSKLHIILLN KNYDQPTTFN FSIDSSKNYT IGNVWAFDRG SSNITQRTPI
VNIKDNTFTY TVPALTACHI VLEAAEPVVY GDLNNDSKVN AVDIMMLKRY ILGIIDNINL
TAADIYFDGV VNSSDYNIMK RYLLKAIEDI PYVPENQAPK AIFTFSPEDP VTDENVVFNA
SNSIDEDGTI AYYVWDFGDG YEGTSTTPTI TYKYKNPGTY KVKLIVTDNQ GASSSFTATI
KVTSATGDNS KFNFEDGTLG GFTTSGTNAT GVVVNTTEKA FKGERGLKWT VTSEGEGTAE
LKLDGGTIVV PGTTMTFRIW IPSGAPIAAI QPYIMPHTPD WSEVLWNSTW KGYTMVKTDD
WNEITLTLPE DVDPTWPQQM GIQVQTIDEG EFTIYVDAID W
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