| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0961 |
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| Symbol | |
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| ID | 4184937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1107802 |
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| End bp | 1112160 |
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| Gene Length | 4359 bp |
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| Protein Length | 1452 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638070958 |
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| Product | beta-glycosidase-like protein |
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| Protein accession | YP_677578 |
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| Protein GI | 110637371 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.496478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA CGTTTAATGC CCTCCTTTTG GTTCTCATAA CTATAAGCAC TGCATTTTCT
CAAACCGGCA TGCTTGAAAA CTTCAACGAC AATGCACTAG ATCCAGGTTG GAAAAGTGTA
CCTGCCGGAA AGTTTTCTTT TGCTGAAAGT GGCGGACAAT TAGTTGTAAC GCCTTCTGCC
GTTGGGCCAG GCTGGGAAAA CATTGAATTT AGTTTTTCTC CAATTGACCT GACAGCTAAC
CAGACTGTAA GTATTAAAAT AAAAAACAGC AGTGCACTTA CGCTGCGTGT GGATCTGATC
GACAATACAG GAAAATCAAC AAACGGTTCT CCCGTATCAA AAAGCATAGC TATAAACAGT
ACATTAACAA CTGTTACATT CGACTTTACA AATAAATTCA GTACATCTGG CGGTGCAGCG
GTTGATAAAA CAAAAATTTC CAAAGTAGTT TTCTTTATAA ATGCAGGCGG CACCAGCTAC
AGTACGCCTG TTACACTTGA CGATGTTACA GTTGGTGATC CGATTGCCAA TGTGCCGGCA
ACCCCGGGCA ACATTGTATT GAATCAGGTT GGCTACGAAT TGACCGGAGC TAAAAAAGCG
ATTTACACCC ATACTTCAAA TACTCTTTCA GCAACAACCT TTGATATATT GACCGCTTCA
AATGCAGTTG TTTATACAGG TACAATTGTT TCAAAAGGCG CTGTAACAGG ATGGACCAAT
AAATATTTCT GGGAATTAAA TTTCAGTGAT TTTCAAACAC CAGGTACATA TAAAATCCGC
GTTGGAACAA AAGTATCGTA TGCCTTTGAT ATTGCTCAAA ACGTTTTATT TAACAAAACA
GCATTTTCAG TTGTAGACTT TTTTAAAGGT ATGCGTTCAA CAAACAATGC AGACAAAACA
CTTTCTTTTA ATGGTCCCCG TAACGATCAG GTAAATGTAT ATGGCGGATG GATTGATGCA
ACAGGAGATC CGGGAAAACA CATGTCGCAT TTATCCTATG CAAATTATTT CAATCCGCAA
CAAATTCCTT TTGTCGTATG GTCTTTATTG AAATCCTATG AAATTTCTCA GGCTTCCTTT
ACAGCAAAAT CAACAGATCT GTTGAATGAG TCGAAATGGG GTGCAGATTA CCTCCTTCGT
AATATTGATA AACAGCAAAA CTATTTGTAT CTGGCAATCT TTGATAACTG GGGGAACAGC
CCGGGTTCAA GAGAAATATG CGAATGGGGT CAGGCAGGTG CCGGCAACGA TGGCGCACGT
ACGCCTAATT TTCAAGCAGG TATGAGAGAA GGCGCAGGAA TGGCAATTGC TGCTTTAGCA
CGTGCCTATC GTATGAACCT GAATGGCGAT AGTACGAAGG CGCAGTATTT AAATGGTGCG
ATCCGTTTAT ATACAAATTT AAAGGCACCT GGTACAGGTT ATGCAACAAA GAACCTTGAA
TATTGTAACG ACCACACAGA AAACATCATT GATTTTTATT GCGGTTTATT AGCAACCATT
GAATTATATA AAGCAACTAA TAATGCTGCT TACTTAGCAG ATGCATCCGT ATATGCAGAT
AAACTTATTG GCATGCTTGA TCCTCAGGGC TGGTTCCGTT CGGATGTAGC AGGTACTCGT
CCGTTTTATC ACGCTGCAGA TGAAGGTTTG CCGTTGGTTA GTTTAATGGA ATACATGGAT
GTGGATGTTT CAAAAAATGC GGCGATTACA CAAGTGCTCA GCAAAAATAT TGCGTGGTAC
ATGAGTATTT CAAAAGAAGT GAATAATCCG TTCAATTACA TGAGAGAATA TTACAAGCCT
TATGTAAACG GGTCCTTAGG CACAGCAAAG AAAGCATTCT TTGTGCCGCA TGATAATGAA
ACGGGTTATT GGTGGCAGGG TGAAAATGCA CGTTTAGCCT CAATGTCTAC CGCATTATTA
TTAGCAGCAC GAAAATTAAA TGCACAATTT ACAATAGGTA CAGATTCAAT CAGTACGTTT
GGTTTAGCTC AATTGGATTG GATACTGGGG AAAAACCCCT TTGATGTTTG TATGATGACC
GGGGCTGGTA CAACAACCTA CCAGAACTAC CCTGTTGCTT CAGCGATACC AAATGTGAAA
GGAGGTATAT GCAATGGTAT TACAGGTAAA GATACAGAAG AAACAAATAT CGATTGGAAA
CCCTATGCTT CTGATGACTG GCAGAACTGG AGATGGATTG AACAATGGCT TCCGCACGAT
GCCTGGTTTT TATTAGCCGT TTCTTCACTG GATGTAGCCA ACACACCACC TCCCGCTGCC
CCCGTTGCTT CCTTTACCAT AAGCAAACAA AGCGTATGCA CAGGAATAAC AACCGTATTA
ACAAATACAT CAACAGGCAG TACCACTTCG TATGTTTGGG ATTTTGGAAC AGGCGCTTCA
ATTTCAGGTA GTACAGCTGC AGGTCCACAC ACCGTTTCAT GGACTACTTC CGGAACAAAA
ACCATTACAT TAACCGTAAC CGGTCCGAAT GGCACGGCAA CTACCACCTC AACGGTAACT
GTAACAGCTG TACCAACAGC TGCAGGTGAA ATAACCGGAG TTGCTTCTGT GTGTGCTTCC
ACAACAGGTG CTACCTATTC CATTCCTGCT ATTGCAACGG CAACAAGCTA TGCATGGACA
TTACCAACGG GCGCTGCCAT TACAGCCGGT GCCAATACAA ATGCCATTAC CGTTTCATTT
GCAACAGCAG GCGGAACCAT TCAGGTTACA CCGGGCAATA CCTGCGGAAC AGCTGCGCCG
GCCTCCAAAA CAATTACATT AACGGACAAA CCAACCGCAG CTGGTGAAAT CAACGGACTT
GCTTCTGTGT GTGCTTCAAC AACAGGTGTT ACCTACTCCA TTCCTGCCAT TGCAACGGCA
ACAAGCTATG CATGGACATT ACCAACGGGT GCTGCCATTA CAGCCGGTGC CAATACAAAT
GCTATTACCA TTTCATTTGC AGCAGCAAGC GGAACCATTC AGGTTACGCC GGGCAATACC
TGCGGAACAG CTGCGCCTGC CTCCAAAACA ATTACATTAA CAGCAAAACC AACAGCTGCA
GGTGAAATAA CCGGAGTTGC TTCTGTGTGT GCTTCAACAA CAGGTATTAC CTACAGCATT
CCTGCTATTG CAACGGCAAC AAGCTATGCA TGGACACTAC CAACCGGCGC TGCCATTACA
GCCGGTGCCA ATTCAAATGC TATTACCGTT TCATTTGCAA CAGCAAGCGG AACCATTCAG
GTTACACCGG GCAATACATG CGGAACAGCT GCGCCGGCCT CCAAAACAAT TACATTAACG
GACAAACCAA CTGCAGCTGG TGAAATAACC GGACTTGCTT CTGTGTGTGC TTCAACAGCA
GGGGTTACCT ACAGCATTCC TGCCATTGCA ACAGCAACAA GCTATGCATG GACATTACCA
ACGGGCGCAT CAATCACTTC GGGAGACAAC ACCAACACTA TTACTGTTTC ATTTGCAACA
ACAGGTGGTA CCATTCAGGT TACACCGGGC AATACCTGCG GAACAGCTGC GCCTGCCTCC
AAAACAATTA CATTAACAGC AAAACCAACA GCTGCAGGTG AAATAACCGG ACTTGCTTCT
GTGTGTGCTT CAACAGCAGG TGTTACCTAC TCCATTCCTG CTATTGCAAC GGCAACAAGC
TATGCATGGA CATTACCAAC GGGCGCTGCC ATTACAGCCG GTGCCAATAC AAATGCTATT
ACCGTTTCAT TTGCAACAGC AAGCGGAACC ATTCAGATTA CGCCATCCAA TACCTGCGGA
ACAGCTGCAC CGGCTTCTAA ATCGGTTCAG ATCATCCCGA TCGGTTCAGC ACCGTGTACT
GCTCCTGTTA CTTCTGCAAT AGAAGGGCCT TCCAACATCG CTCCGAATGT TCAAAACGTT
ACGTTCTCTG TAACTCAACA TGCCGGTTCC GCTTATACCT GGGCAGTGCC AAACGGTGCA
ACGATCGTGA GCGGATCAGG AAGCAGTTCA ATCGTTGTAA ATTTTGGCAA CAGCGGAGGT
ATCGTTTCAG TGCAGGAATC GAATAGTTAT GGAACGGGTA CTGCTGTTAC AAAAAACGTT
ACCATGATCT CAACAGCTAT TGACGCTTCC TCTGTAACAG ATATACAAAT CAATATCCAT
CCGAATCCAA GTGAACAATA TTGTTTACTT ACCACAACAA CTCCTGCAGA AGAACTTATT
GATGTAACAA TCATTGACAT GAAAGGTGTT GTTATCATGC ACCAGCAATG GAATACCAGC
CAGCCGTTAG TACTTAACTC AGATCTGAAT GCAGGTATCT ACATTGTTCA ATTAAAAATA
CAGGAACAGT TCATTACGAA ACGATTAATA CGATTATAG
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| Protein sequence | MKNTFNALLL VLITISTAFS QTGMLENFND NALDPGWKSV PAGKFSFAES GGQLVVTPSA
VGPGWENIEF SFSPIDLTAN QTVSIKIKNS SALTLRVDLI DNTGKSTNGS PVSKSIAINS
TLTTVTFDFT NKFSTSGGAA VDKTKISKVV FFINAGGTSY STPVTLDDVT VGDPIANVPA
TPGNIVLNQV GYELTGAKKA IYTHTSNTLS ATTFDILTAS NAVVYTGTIV SKGAVTGWTN
KYFWELNFSD FQTPGTYKIR VGTKVSYAFD IAQNVLFNKT AFSVVDFFKG MRSTNNADKT
LSFNGPRNDQ VNVYGGWIDA TGDPGKHMSH LSYANYFNPQ QIPFVVWSLL KSYEISQASF
TAKSTDLLNE SKWGADYLLR NIDKQQNYLY LAIFDNWGNS PGSREICEWG QAGAGNDGAR
TPNFQAGMRE GAGMAIAALA RAYRMNLNGD STKAQYLNGA IRLYTNLKAP GTGYATKNLE
YCNDHTENII DFYCGLLATI ELYKATNNAA YLADASVYAD KLIGMLDPQG WFRSDVAGTR
PFYHAADEGL PLVSLMEYMD VDVSKNAAIT QVLSKNIAWY MSISKEVNNP FNYMREYYKP
YVNGSLGTAK KAFFVPHDNE TGYWWQGENA RLASMSTALL LAARKLNAQF TIGTDSISTF
GLAQLDWILG KNPFDVCMMT GAGTTTYQNY PVASAIPNVK GGICNGITGK DTEETNIDWK
PYASDDWQNW RWIEQWLPHD AWFLLAVSSL DVANTPPPAA PVASFTISKQ SVCTGITTVL
TNTSTGSTTS YVWDFGTGAS ISGSTAAGPH TVSWTTSGTK TITLTVTGPN GTATTTSTVT
VTAVPTAAGE ITGVASVCAS TTGATYSIPA IATATSYAWT LPTGAAITAG ANTNAITVSF
ATAGGTIQVT PGNTCGTAAP ASKTITLTDK PTAAGEINGL ASVCASTTGV TYSIPAIATA
TSYAWTLPTG AAITAGANTN AITISFAAAS GTIQVTPGNT CGTAAPASKT ITLTAKPTAA
GEITGVASVC ASTTGITYSI PAIATATSYA WTLPTGAAIT AGANSNAITV SFATASGTIQ
VTPGNTCGTA APASKTITLT DKPTAAGEIT GLASVCASTA GVTYSIPAIA TATSYAWTLP
TGASITSGDN TNTITVSFAT TGGTIQVTPG NTCGTAAPAS KTITLTAKPT AAGEITGLAS
VCASTAGVTY SIPAIATATS YAWTLPTGAA ITAGANTNAI TVSFATASGT IQITPSNTCG
TAAPASKSVQ IIPIGSAPCT APVTSAIEGP SNIAPNVQNV TFSVTQHAGS AYTWAVPNGA
TIVSGSGSSS IVVNFGNSGG IVSVQESNSY GTGTAVTKNV TMISTAIDAS SVTDIQINIH
PNPSEQYCLL TTTTPAEELI DVTIIDMKGV VIMHQQWNTS QPLVLNSDLN AGIYIVQLKI
QEQFITKRLI RL
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