Gene Phep_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0675 
Symbol 
ID8251763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp783456 
End bp786686 
Gene Length3231 bp 
Protein Length1076 aa 
Translation table11 
GC content47% 
IMG OID644934324 
ProductCellulase 
Protein accessionYP_003090959 
Protein GI255530587 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.379443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAT ATATGGTGAT GTACATCCGC AAAATGAGCT TATTTTTTTC TTTCTGCTTT 
CTGCTCTATA CTTCTCAGGC TGCGGAAAGC AGCGGAGCCT GGATCAGGAT CAATCAGCTT
GGGTATTTGC CCAAAGGAAT TAAAGTAGCC GTATGGGTAG GTAAGCAAGG TACAGCAGCA
GAAACTTTCC AGGTATTGGA AGCCAAAACA TCGGCCCTGG TTTTTAGGGG TAAAACAAGT
GCAGCCTACG GAGCTTATGG TCCTTTTAAC CAATCTTATC GTCTGAATTT TAGTGCTTTT
ACCAAACCTG GTCATTATTA TATCCAATGT GGCGAGGTTA GATCCCCTGT CTTCCGGCTG
GCGGATAACA TTTATGAAGG AACAGCAGAT TTTAGCCTCA GGTACATGCG GCAGCAGCGC
AGTGGCTTTA ACCCCTTTTT AAAAGATTCC TGCCATACTA AAGATGGTTT TACGATGTAT
GGACCTATGC GGGACAGTAC ACATATAGAT GTATCGGGTG GCTGGCACGA TGCAACGGAT
TATCTGCAGT ATGTAACCAC TTCGGCAAAT GCTACTTATC ATTTGCTTGC GGCTTACCGG
GATTTCCCGG AAGTATTTTC CGACCGGCAC CAGGCCAACG GCCTTGAAGG GAGCAATGGC
ACTGCTGATG TATTGGATGA AGCAAAGTGG GGACTGAACT GGCTTTTAAA AATGCATCCT
AAAAAGAACT GGATGTTTAA CCAGCTGGCA GACGACCGTG ACCATGCAGG TATGCGGCTG
CCCAATAAAG ACCTGGTTGA TTATGGCATG GGCCAGGGAA ATGCAAGGGT GGTGTATTTT
GCCAATGGAG AACCACAGGG ATTGGGCAAA TATAAAAACC GCTCAACGGG CCTGGCCTCT
ACAGCTGGTA AGTTTTCAAG TGCCTTCGCT TTGGCGGCTT CAGTCTATCA AAAAACTGAT
CCGGGCCTGG CCAAGCTGTT CCGGGAAAAA TCATTGTCGG CCTATAGCCT TGGTTTGGCC
AGGCCCGGTG TAAGCCAGAC AGCCCCAAAC CGGGAGCCTT ATTTTTATGA AGAAGACAAT
TGGGTGGATG ATATGGAGCT TGCATCGGCT GCTTTGTACA GGTTAACCGG TGGGCAGCAC
TACCTTAAGC AATCGCTCCA ATACAGTTTA GCAGAACAGG TTACGCCCTG GATGGGTGCC
GATACGGCAA GACACTACCA ATGGTACCCG TTTCACAATT TCGGGCATGC AGAGCTGGCT
GCTGCTACCG ATGGAAAAAC AAAGGCGGCA TTGATCGGTT ATTACCGGCA GGGAATTGAA
AAGGTGCTGG GCAAGGCAAA GCAAAATGCT TTTTACCGCG GTGTGCCTTT CATCTGGTGT
TCCAATAATT TAACTACCTC TTTTGCCATT CAATGTGCAT TGTATAGAAA ACTGAGTGGA
GATGAACAGT ATGCCGAGCT GGAACAGGCT TGTGTTGATT GGCTTTTTGG CTGTAACCCA
TGGGGAAAAT GTATGGTATA TGGGATGCCG GCCATGGGAG ATACCCCTGG AGATCCGCAT
TCTTCCTTAT CCTATCTGTA TCATTATCCC CTGGACGGGG GGCTGGTAGA TGGCCCGGTA
TACGGGAGTA TTTTTAAGCA CCTGCGCGGA CTGACATTGA GCAAGCCTGA TGCCTACGCC
GAATTTCAGT CAGACCTGGT GGTTTACCAC GACGACAAAG GCGATTACAG TACCAATGAG
CCTACCATGG ATGGCACCGC TTCGCTGGTA TACCTGCTGG CCGGCAAAGC CAGTGAAGCC
AGACACAACA TTACCTTTCC CGAATCTCAT GGTGCCATCA TCAGAGGAGA TACGAGTTCA
AAAAAACTGG CCCTGGTATT TACAGGTGAT GAGTTTGGTG ATGGGGCTGC ATTTATTGCA
AATGCTTTAA AACAGGAACA GGTACATGGC TCTTTCTTTT TGACAGGTAA TTTTTACCGC
AACAAAGATT TTAAAAAGGT GATTGCACAA CTGAAACAGG ATGGGAATTA CCTGGGCTCA
CATTCGGACA GGCACCTGCT GTATTGCGAC TGGGGCAAAA GGGACAGCCT GCTGGTCACA
AAGGCACAAT TTGAAAAGGA TATTGCAGCC GGATATCTGG AATTGAAGAA GTTTGGGATT
GAGAAAAATC AGGCCCCTTA TTTTTTACCA CCTTATGAGT GGTATAACGA TACCATTGCT
TCCTGGACCA GGAGCTTGGA CCTTCATCTG GTTAATTTTA CACCGGGTAC CCGTTCCAAT
GCCGATTATA CCTATCCGGA AATGGGGGCT AAATATATCA ACAGTGAAAC GGTGCAGCAA
TCTATTCTCA ATTACGAACA GAAAGACAAG AACGGGTTAA ATGGTTTTAT TTTATTGGTA
CACATAGGAA CAGACCCCAG AAGGAAGGAT AAATTTTATT CCAGGTTGCC CCGGCTGATC
CCTGCTTTAA AAAGCAAGGG CTACCAGTTT GTGCGGATTG ACGAATTGCT GAAACAAGAA
CCCGCCGGTA TTCCGGCAGC TTACTTAAAA GACAGCCTTC CCGCATTGGT TGCAAAATGT
AAAAACCTGT TGGACCATGC TTATATGGCC CAGACCCTTA TTGCTGAAAC GGATACCTTG
CCAGGCTGGG AAGGTTTGCC TGTAAAACTG TATGCCTATA AAACAGGGAA AGACCTGTAT
ACGGGGCAGC CCAAAACAGG TAAGGTATAT CTGCTGAACC CTTCGGCAGA AAAGCTGGCC
ACCTGGATCA TGACCACCTG CTGGGAAGTT AAGAAAAGTG TGGAAGCAAA ATACATCAAT
AAGGTATTTG AAACCATACG TGGACAATCG GGTGCCCAAT TTCCGGTAAA GGGGGTGGTT
TATGAAGACC AGTATACCCG TAATTTTCAG GAGCCATACA TTTTTAAAGA TGGGGTAACG
GTTTATGTGG CCGACAGTAC CATGTTCCCG AGAGATAAAA CCTGTACCCC CGCGCAGCTG
GATTTTTATT TAAGGATTGA AAACAAAGAT TTAAAGGCGC AGACCGGAAG GTACGGCCGC
ATCATCAGTA CCACCAGGGA AATGTATCTC GCCAATGGCG GAACGGCAGA TGTGGGCGAT
GCAGAACACA GGAAAATAAA ATGGCTGGAT ATTGTAAAAG ACCTTTATAA GAAAGCATGG
CGGTCGGACA AAAATGAGCT GATGATTGCC TGGGCCAGAC AAAACCTGTA A
 
Protein sequence
MHKYMVMYIR KMSLFFSFCF LLYTSQAAES SGAWIRINQL GYLPKGIKVA VWVGKQGTAA 
ETFQVLEAKT SALVFRGKTS AAYGAYGPFN QSYRLNFSAF TKPGHYYIQC GEVRSPVFRL
ADNIYEGTAD FSLRYMRQQR SGFNPFLKDS CHTKDGFTMY GPMRDSTHID VSGGWHDATD
YLQYVTTSAN ATYHLLAAYR DFPEVFSDRH QANGLEGSNG TADVLDEAKW GLNWLLKMHP
KKNWMFNQLA DDRDHAGMRL PNKDLVDYGM GQGNARVVYF ANGEPQGLGK YKNRSTGLAS
TAGKFSSAFA LAASVYQKTD PGLAKLFREK SLSAYSLGLA RPGVSQTAPN REPYFYEEDN
WVDDMELASA ALYRLTGGQH YLKQSLQYSL AEQVTPWMGA DTARHYQWYP FHNFGHAELA
AATDGKTKAA LIGYYRQGIE KVLGKAKQNA FYRGVPFIWC SNNLTTSFAI QCALYRKLSG
DEQYAELEQA CVDWLFGCNP WGKCMVYGMP AMGDTPGDPH SSLSYLYHYP LDGGLVDGPV
YGSIFKHLRG LTLSKPDAYA EFQSDLVVYH DDKGDYSTNE PTMDGTASLV YLLAGKASEA
RHNITFPESH GAIIRGDTSS KKLALVFTGD EFGDGAAFIA NALKQEQVHG SFFLTGNFYR
NKDFKKVIAQ LKQDGNYLGS HSDRHLLYCD WGKRDSLLVT KAQFEKDIAA GYLELKKFGI
EKNQAPYFLP PYEWYNDTIA SWTRSLDLHL VNFTPGTRSN ADYTYPEMGA KYINSETVQQ
SILNYEQKDK NGLNGFILLV HIGTDPRRKD KFYSRLPRLI PALKSKGYQF VRIDELLKQE
PAGIPAAYLK DSLPALVAKC KNLLDHAYMA QTLIAETDTL PGWEGLPVKL YAYKTGKDLY
TGQPKTGKVY LLNPSAEKLA TWIMTTCWEV KKSVEAKYIN KVFETIRGQS GAQFPVKGVV
YEDQYTRNFQ EPYIFKDGVT VYVADSTMFP RDKTCTPAQL DFYLRIENKD LKAQTGRYGR
IISTTREMYL ANGGTADVGD AEHRKIKWLD IVKDLYKKAW RSDKNELMIA WARQNL