| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0144 |
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| Symbol | |
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| ID | 5137259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 140450 |
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| End bp | 142174 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531604 |
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| Product | endoglucanase-related protein |
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| Protein accession | YP_001216109 |
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| Protein GI | 147673295 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTAC TGACCAACCA CATTGGCTAT GAAACCCAAG GCCCTAAACA GGCGGTGTTG
CTGTGTGGAC AAACACAACT CATGGACGAT TGTGTGCTTT TGGTTTGCGC TCGTAGTCAC
CAAACCGTTG CCAAGCTCGC TATTGAGTGG CACGGCAAGG TCGACAACTG GCATCAGGGA
CAATTTCATC GTATCGATTT TTCCGATTTC ACGACGCCAG GCGACTATTA TCTGCGCCTG
GAACACACGC ATTCTGCCAC TTTTACTATT GCGCGAGGCG TATTAATGCA ACGCACATTT
TCTGATGTGC TGCACTACTT TAAATCGCAA CGCTGCTCTG GGCAGTTTGA TCAACAAGAC
AAGCAAGTAC CGCTGCTGAG CACATCAACC ACTGCCGATG TGCACGGTGG CTGGTACGAC
GCTTCAGGTG ACGTTAGCAA GTATCTCAGT CACCTTTCTT ACGCTAACTA TTTGAACCCA
CAACAAACAC CTTTGGTGGT CTGGAACATG CTCAAAGGGT TAGCGGTTTT ACAACATCAC
TCGGGTTTTG CATCGTTTTC TCGCACTCGC CTCAAGGATG AAGCGTTGTT TGGTGCTGAT
TTTCTACGCC GTATGCAAAA CTCCGAGGGA TTTTTTTATA TGACCGTCTT TGACAAATGG
AGCAAAGACA CCAAACAACG GGAGATTTGT GCCTACGCGA CCCAACAAGG CCATAAATCC
GATGATTATC AAGCGGGTTT TCGCCAAGGT GGGGGCATGG CGATTGCGGC ACTTGCCGCA
GCCGCGCGTT TGGATACGCA CGGCGAGTTC ACACAAGCTG ACTATTTACA AGCGGCAGAA
AATGGCTACT GGCACCTCAA AGAGCATAAC CTCGCCTACC TCAATGATGG GGTTGAAAAC
ATCATTGATG AGTACTGCGC ACTCTTGGCG TGTTGCGAAC TTTACCGCAC GACAGAGAAT
GACCAATATC TGGCTCAAGC TCGTGAGTGG GCACAGCGTT TAGCCAAGCG CCAATGCAGC
GATGAACAAA TTGCGCACTA CTGGTCTGCC ACCAGCAACG GTGAGCGCCC ATACTTCCAC
GCCAGTGATG CTGGTCTGCC TGTCATTGCA CTTTGCGAGT ATCTGAATAT TGAAACGGAT
ACGGCTAACT ACGCTCAACT CCAAAGAGTG GTCGAGCAAG CCTGTCAATT CGAGTTAGCG
ATAACTCAAC AAGTCTCCAA CCCGTTTGGG TACCCGCGTC AGTATGTCAA AGGGGTGGAA
AGCGCCAAAC GCACCAGTTT CTTTATCGCT CAAGACAACG AAAGTGGTTA CTGGTGGCAA
GGTGAAAATG CCCGTCTCGC CTCGTTGGCG AGCATGGCCT ATCTTGCTCA GCCTCATTTG
AGTACCGCTA TCGCTAAACC GCTTGAACAG TGGTCACAAA ATGCCCTGAA CTGGATTGTC
GGGCTCAATC CTTACAACAT GTGCATGCTC GATGGACATG GGCACAATAA TCCCGATTAC
TTACCTCATT TAGGCTTTTT CAATGCCAAA GGCGGTGTGT GTAACGGCAT AACCGCGGGC
TTTGATGACC CAAGAGATAT CGCGTTTAAC CCAGCAGGGC AAAAAGATGA CATGCTGCAA
AACTGGCGTT GGGGAGAACA ATGGATCCCG CATGGCGCTT GGTATCTGCT TGCCATCATC
AGCCAATTTG CTCACTTTAC CGCTCACGGG GAGGAGAACC AATGA
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| Protein sequence | MLLLTNHIGY ETQGPKQAVL LCGQTQLMDD CVLLVCARSH QTVAKLAIEW HGKVDNWHQG
QFHRIDFSDF TTPGDYYLRL EHTHSATFTI ARGVLMQRTF SDVLHYFKSQ RCSGQFDQQD
KQVPLLSTST TADVHGGWYD ASGDVSKYLS HLSYANYLNP QQTPLVVWNM LKGLAVLQHH
SGFASFSRTR LKDEALFGAD FLRRMQNSEG FFYMTVFDKW SKDTKQREIC AYATQQGHKS
DDYQAGFRQG GGMAIAALAA AARLDTHGEF TQADYLQAAE NGYWHLKEHN LAYLNDGVEN
IIDEYCALLA CCELYRTTEN DQYLAQAREW AQRLAKRQCS DEQIAHYWSA TSNGERPYFH
ASDAGLPVIA LCEYLNIETD TANYAQLQRV VEQACQFELA ITQQVSNPFG YPRQYVKGVE
SAKRTSFFIA QDNESGYWWQ GENARLASLA SMAYLAQPHL STAIAKPLEQ WSQNALNWIV
GLNPYNMCML DGHGHNNPDY LPHLGFFNAK GGVCNGITAG FDDPRDIAFN PAGQKDDMLQ
NWRWGEQWIP HGAWYLLAII SQFAHFTAHG EENQ
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