55 homologs were found in PanDaTox collection
for query gene CPF_0126 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008261  CPF_0126  C4-dicarboxylate transporter family protein  100 
 
 		 338 aa  674    Clostridium perfringens ATCC 13124  Bacteria  normal  0.307461  n/a   
 
 
-
 
NC_008262  CPR_0123  C4-dicarboxylate transporter  98.22 
 
 		 338 aa  664    Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I0679  putative C4-dicarboxylate/malic acid transport protein  29.9 
 
 		 329 aa  146  6e-34  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0950356  n/a   
 
 
-
 
NC_009783  VIBHAR_03304  hypothetical protein  29.01 
 
 		 324 aa  144  2e-33  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002682  tellurite resistance protein  28.4 
 
 		 324 aa  143  5e-33  Vibrio sp. Ex25  Bacteria  normal  0.0518365  n/a   
 
 
-
 
NC_009831  Ssed_1717  C4-dicarboxylate transporter/malic acid transport protein  30.37 
 
 		 322 aa  138  1e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  1  hitchhiker  0.0000810038 
 
 
-
 
NC_010506  Swoo_2874  C4-dicarboxylate transporter/malic acid transport protein  28.17 
 
 		 322 aa  134  1.9999999999999998e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.0144876 
 
 
-
 
NC_008322  Shewmr7_1565  C4-dicarboxylate transporter/malic acid transport protein  29.41 
 
 		 329 aa  134  1.9999999999999998e-30  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.0625081 
 
 
-
 
NC_008577  Shewana3_1559  C4-dicarboxylate transporter/malic acid transport protein  28.48 
 
 		 329 aa  134  1.9999999999999998e-30  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.239872 
 
 
-
 
NC_008321  Shewmr4_1498  C4-dicarboxylate transporter/malic acid transport protein  28.79 
 
 		 329 aa  133  5e-30  Shewanella sp. MR-4  Bacteria  normal  1  hitchhiker  0.00475764 
 
 
-
 
NC_009438  Sputcn32_2372  C4-dicarboxylate transporter/malic acid transport protein  29.1 
 
 		 334 aa  133  5e-30  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_2906  hypothetical protein  28.78 
 
 		 332 aa  132  7.999999999999999e-30  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1906  hypothetical protein  27.24 
 
 		 322 aa  129  8.000000000000001e-29  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_1697  C4-dicarboxylate transporter/malic acid transport protein  27.74 
 
 		 332 aa  128  1.0000000000000001e-28  Shewanella baltica OS223  Bacteria  normal  0.536393  hitchhiker  0.000152947 
 
 
-
 
NC_009052  Sbal_2665  C4-dicarboxylate transporter/malic acid transport protein  27.67 
 
 		 332 aa  128  1.0000000000000001e-28  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_0784  C4-dicarboxylate transporter/malic acid transport protein  26.45 
 
 		 322 aa  128  1.0000000000000001e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2687  C4-dicarboxylate transporter/malic acid transport protein  27.74 
 
 		 332 aa  128  1.0000000000000001e-28  Shewanella baltica OS185  Bacteria  normal  0.123467  n/a   
 
 
-
 
NC_009997  Sbal195_2766  C4-dicarboxylate transporter/malic acid transport protein  27.67 
 
 		 332 aa  128  2.0000000000000002e-28  Shewanella baltica OS195  Bacteria  normal  1  normal  0.0195102 
 
 
-
 
NC_009092  Shew_2530  C4-dicarboxylate transporter/malic acid transport protein  27.91 
 
 		 323 aa  127  2.0000000000000002e-28  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1679  C4-dicarboxylate transporter/malic acid transport protein  26.79 
 
 		 330 aa  123  5e-27  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0920499  n/a   
 
 
-
 
NC_008700  Sama_1504  hypothetical protein  26.48 
 
 		 336 aa  120  3e-26  Shewanella amazonensis SB2B  Bacteria  normal  0.34521  normal  1 
 
 
-
 
NC_013204  Elen_0220  C4-dicarboxylate transporter/malic acid transport protein  27.68 
 
 		 329 aa  114  3e-24  Eggerthella lenta DSM 2243  Bacteria  normal  0.698092  normal  1 
 
 
-
 
NC_010001  Cphy_1475  C4-dicarboxylate transporter/malic acid transport protein  25.64 
 
 		 308 aa  105  8e-22  Clostridium phytofermentans ISDg  Bacteria  normal  0.687324  n/a   
 
 
-
 
NC_014150  Bmur_1960  C4-dicarboxylate transporter/malic acid transport protein  25.96 
 
 		 313 aa  103  4e-21  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_008506  LACR_D35  tellurite resistance protein related permease  25.64 
 
 		 323 aa  99.8  6e-20  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0741739  n/a   
 
 
-
 
NC_013457  VEA_000479  tellurite resistance protein  23.87 
 
 		 315 aa  94  3e-18  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_06234  hypothetical protein  25.17 
 
 		 299 aa  90.9  3e-17  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008527  LACR_0424  tellurite resistance protein related permease  27.1 
 
 		 280 aa  90.9  3e-17  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0104982  n/a   
 
 
-
 
NC_013203  Apar_1208  C4-dicarboxylate transporter/malic acid transport protein  27.27 
 
 		 307 aa  90.1  5e-17  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_0374  C4-dicarboxylate transporter/malic acid transport protein  24.91 
 
 		 321 aa  76.3  0.0000000000008  Marinobacter aquaeolei VT8  Bacteria  normal  0.273821  n/a   
 
 
-
 
NC_009487  SaurJH9_1231  C4-dicarboxylate transporter/malic acid transport protein  24.54 
 
 		 315 aa  68.9  0.0000000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1256  C4-dicarboxylate transporter/malic acid transport protein  24.54 
 
 		 315 aa  68.9  0.0000000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.816232  n/a   
 
 
-
 
NC_008340  Mlg_1275  C4-dicarboxylate transporter/malic acid transport protein  23 
 
 		 323 aa  58.5  0.0000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.360246  normal  1 
 
 
-
 
NC_009456  VC0395_0457  hypothetical protein  24.76 
 
 		 210 aa  57.8  0.0000002  Vibrio cholerae O395  Bacteria  normal  0.5799  n/a   
 
 
-
 
NC_009428  Rsph17025_2391  C4-dicarboxylate transporter/malic acid transport protein  25.11 
 
 		 324 aa  57  0.0000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.482624  normal  0.310248 
 
 
-
 
NC_009523  RoseRS_2285  C4-dicarboxylate transporter/malic acid transport protein  23.4 
 
 		 342 aa  57  0.0000005  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_1964  C4-dicarboxylate transporter/malic acid transport protein  23.75 
 
 		 341 aa  56.2  0.0000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.449611  normal  1 
 
 
-
 
NC_010831  Cphamn1_1488  C4-dicarboxylate transporter/malic acid transport protein  25.53 
 
 		 326 aa  55.8  0.000001  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.138957  normal  1 
 
 
-
 
NC_004116  SAG1215  hypothetical protein  24.89 
 
 		 305 aa  51.6  0.00002  Streptococcus agalactiae 2603V/R  Bacteria  decreased coverage  0.00293385  n/a   
 
 
-
 
NC_011059  Paes_1250  C4-dicarboxylate transporter/malic acid transport protein  25 
 
 		 339 aa  48.5  0.0001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  0.618998 
 
 
-
 
NC_010505  Mrad2831_4679  potassium-tellurite ethidium and proflavin transporter  25.1 
 
 		 342 aa  48.5  0.0001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012792  Vapar_5797  C4-dicarboxylate transporter/malic acid transport protein  24.8 
 
 		 332 aa  48.1  0.0002  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_010803  Clim_1428  C4-dicarboxylate transporter/malic acid transport protein  23.49 
 
 		 326 aa  48.1  0.0002  Chlorobium limicola DSM 245  Bacteria  normal  0.648837  n/a   
 
 
-
 
NC_008599  CFF8240_0914  C4-dicarboxylate transporter/malic acid transport protein  22.51 
 
 		 357 aa  47.8  0.0002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.120937  n/a   
 
 
-
 
NC_007575  Suden_0767  C4-dicarboxylate transporter/malic acid transport protein  23.6 
 
 		 320 aa  47.4  0.0004  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.000262712  n/a   
 
 
-
 
NC_008789  Hhal_0251  C4-dicarboxylate transporter/malic acid transport protein  22.18 
 
 		 320 aa  46.6  0.0006  Halorhodospira halophila SL1  Bacteria  normal  0.448542  n/a   
 
 
-
 
NC_007802  Jann_2959  C4-dicarboxylate transporter/malic acid transport protein  23.67 
 
 		 315 aa  45.8  0.001  Jannaschia sp. CCS1  Bacteria  normal  0.465608  normal  0.0266391 
 
 
-
 
NC_011757  Mchl_0156  C4-dicarboxylate transporter/malic acid transport protein  20.28 
 
 		 335 aa  44.7  0.002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.131212  normal  0.103704 
 
 
-
 
NC_010172  Mext_0212  C4-dicarboxylate transporter/malic acid transport protein  20.92 
 
 		 335 aa  45.1  0.002  Methylobacterium extorquens PA1  Bacteria  normal  0.187317  normal  1 
 
 
-
 
NC_011758  Mchl_5718  C4-dicarboxylate transporter/malic acid transport protein  19.05 
 
 		 385 aa  44.3  0.003  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.722941 
 
 
-
 
NC_007348  Reut_B4485  C4-dicarboxylate transporter/malic acid transport protein  20.09 
 
 		 331 aa  44.3  0.003  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_0699  exfoliative exotoxin B, putative  23.34 
 
 		 295 aa  44.3  0.003  Streptococcus thermophilus LMD-9  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_1367  potassium-tellurite ethidium and proflavin transporter  22.83 
 
 		 325 aa  43.5  0.005  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_3048  C4-dicarboxylate transporter/malic acid transport protein  24.22 
 
 		 317 aa  43.5  0.005  Magnetococcus sp. MC-1  Bacteria  normal  0.015638  normal  0.0398441 
 
 
-
 
NC_008639  Cpha266_1002  C4-dicarboxylate transporter/malic acid transport protein  23.77 
 
 		 326 aa  42.7  0.009  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>