32 homologs were found in PanDaTox collection
for query gene Bphy_0249 on replicon NC_010622
Organism: Burkholderia phymatum STM815



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010622  Bphy_0249  XRE family transcriptional regulator  100 
 
 
135 aa  262  1e-69  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1266  XRE family transcriptional regulator  40.79 
 
 
127 aa  66.6  0.0000000001  Shewanella loihica PV-4  Bacteria  normal  normal  0.119071 
 
 
-
 
NC_011663  Sbal223_0386  transcriptional regulator, XRE family  34.29 
 
 
129 aa  56.6  0.0000001  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00000617682 
 
 
-
 
NC_009901  Spea_1279  XRE family transcriptional regulator  37.14 
 
 
118 aa  51.2  0.000005  Shewanella pealeana ATCC 700345  Bacteria  normal  0.51475  n/a   
 
 
-
 
NC_011353  ECH74115_5795  putative transcription regulator  39.34 
 
 
154 aa  45.8  0.0002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.372775  normal 
 
 
-
 
NC_012918  GM21_0802  transcriptional regulator, XRE family  41.82 
 
 
106 aa  44.7  0.0005  Geobacter sp. M21  Bacteria  n/a    normal  0.237035 
 
 
-
 
NC_009438  Sputcn32_2913  XRE family transcriptional regulator  25.93 
 
 
140 aa  44.3  0.0006  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0591  XRE family transcriptional regulator  33.33 
 
 
113 aa  43.5  0.0009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3421  transcriptional regulator, XRE family  38.33 
 
 
154 aa  43.1  0.001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_17420  predicted transcriptional regulator  40.74 
 
 
414 aa  43.1  0.001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.697974  normal 
 
 
-
 
NC_012791  Vapar_1987  transcriptional regulator, XRE family  37.93 
 
 
187 aa  43.5  0.001  Variovorax paradoxus S110  Bacteria  normal  0.144245  n/a   
 
 
-
 
NC_011898  Ccel_0058  transcriptional regulator, XRE family  35.62 
 
 
112 aa  42.7  0.001  Clostridium cellulolyticum H10  Bacteria  normal  0.0711688  n/a   
 
 
-
 
NC_009487  SaurJH9_0309  XRE family transcriptional regulator  33.33 
 
 
107 aa  42.4  0.002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.793931  n/a   
 
 
-
 
NC_010816  BLD_0733  putative transcriptional regulator  34.38 
 
 
161 aa  42.4  0.002  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2429  XRE family transcriptional regulator  34.38 
 
 
143 aa  42.4  0.002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.214939  normal 
 
 
-
 
NC_009632  SaurJH1_0316  helix-turn-helix domain-containing protein  33.33 
 
 
107 aa  42.4  0.002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1907  XRE family transcriptional regulator  34.78 
 
 
107 aa  42.4  0.002  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2575  XRE family transcriptional regulator  31.34 
 
 
230 aa  42.4  0.002  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.556687 
 
 
-
 
NC_011886  Achl_3519  transcriptional regulator, XRE family  30.77 
 
 
210 aa  41.6  0.003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0116433 
 
 
-
 
NC_007973  Rmet_2163  XRE family transcriptional regulator  42.22 
 
 
710 aa  42  0.003  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3499  XRE family transcriptional regulator  41.3 
 
 
712 aa  41.6  0.003  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1445  transcriptional regulator, XRE family  39.06 
 
 
147 aa  41.2  0.004  Eggerthella lenta DSM 2243  Bacteria  normal  0.275315  normal  0.432426 
 
 
-
 
NC_013093  Amir_1944  transcriptional regulator, XRE family  32.35 
 
 
279 aa  40.8  0.007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3441  XRE family transcriptional regulator  33 
 
 
187 aa  40.4  0.008  Pseudomonas putida W619  Bacteria  normal  normal  0.404086 
 
 
-
 
NC_010322  PputGB1_1887  XRE family transcriptional regulator  36.76 
 
 
104 aa  40.4  0.008  Pseudomonas putida GB-1  Bacteria  normal  0.603654  normal 
 
 
-
 
NC_014210  Ndas_4245  transcriptional regulator, XRE family  34.55 
 
 
288 aa  40.4  0.008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.116487 
 
 
-
 
NC_009077  Mjls_5265  XRE family transcriptional regulator  30.99 
 
 
219 aa  40.4  0.009  Mycobacterium sp. JLS  Bacteria  normal  normal  0.223709 
 
 
-
 
NC_008705  Mkms_4986  XRE family transcriptional regulator  30.99 
 
 
219 aa  40.4  0.009  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_18420  predicted transcriptional regulator  40.68 
 
 
149 aa  40.4  0.009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.189768  normal 
 
 
-
 
NC_008146  Mmcs_4897  XRE family transcriptional regulator  30.99 
 
 
219 aa  40.4  0.009  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7925  putative transcriptional regulator, XRE family  38.24 
 
 
199 aa  40  0.01  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.421089 
 
 
-
 
NC_007333  Tfu_1906  helix-hairpin-helix DNA-binding motif-containing protein  36.78 
 
 
128 aa  40  0.01  Thermobifida fusca YX  Bacteria  hitchhiker  0.000000000040825  n/a   
 
 
-
 
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