Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0386 |
Symbol | |
ID | 7089524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 427459 |
End bp | 427848 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643459306 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002356343 |
Protein GI | 217971592 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00000617682 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGATA AATTAGTTTC ATACTCTTCC GTTTTAGGCG TTGTTGTTGC TAATAAGCGC AAAGAATTTG GCATAGAACA AAGTGTAATG GCTGACTGTA TGGGGTTGTC ACAAGCTAGC TATAGCCGTT TAGAATCAGG TAAGTCGACA TTTTCAGTCG ATCAACTGTT TGAGTGTGCA CAGGCATTGA ACATACCAGC AGCAGAGCTT TTTAATTCTG TCGTAAATAC AGTAGGCAAC TTGCAGTCAA GCAATGACGT AGTCGTACAA GGCCAGCCTC GAGGCAATAC AACTAAAGCT AAAGCTGCAG AAGGTAGTGG CGTTGGGACC TTTATTGCTG GTGCAGCATT GGGTGCGCTT ATTATTGGAT TAGCGGGTAA GTCGAAGTGA
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Protein sequence | MQDKLVSYSS VLGVVVANKR KEFGIEQSVM ADCMGLSQAS YSRLESGKST FSVDQLFECA QALNIPAAEL FNSVVNTVGN LQSSNDVVVQ GQPRGNTTKA KAAEGSGVGT FIAGAALGAL IIGLAGKSK
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