| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2913 |
|---|
| Symbol | |
|---|
| ID | 5078139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3379039 |
|---|
| End bp | 3379461 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640500114 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001184429 |
|---|
| Protein GI | 146294005 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCT CAATGAACAC AGTTCTTGCA TTAGCGATGA AAGAGATTCG AACTACGCAA
GGCTATAATC AAAAGGCAAT GGCAGATTTG CTTGGAATGA CAAATGCGGG CTGGGGAAAA
GTTGAGAATG GCTTAACAAC AATTTCTGTC GAGATGCTGT TTAGGTTTGG AAAGCTTGTA
AATATGCCGC CTTCCCACAT TCTTGTAAAA GTAGAAGAAA CGATTAAGTT ACTCGAAAAA
GAGGGGTTTG AATTCACTGC AGTGTCGACA GATGAAGATA GTTTACTTCA GGGATATTCT
TGGTCTAAAG CCGTCGGGAG CGGTGTGGCG GGATTTGCAT TACCATTTAA AGTAGATGTA
GAGCTAGACA TAGTTTCTCG TGCTGCGACT TTAGCGAAAA ATATGGGAAA ATTTTTCAAA
TAG
|
|---|
| Protein sequence | MKTSMNTVLA LAMKEIRTTQ GYNQKAMADL LGMTNAGWGK VENGLTTISV EMLFRFGKLV
NMPPSHILVK VEETIKLLEK EGFEFTAVST DEDSLLQGYS WSKAVGSGVA GFALPFKVDV
ELDIVSRAAT LAKNMGKFFK
|
|---|
| |