Gene Svir_17420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_17420 
Symbol 
ID8387070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1801633 
End bp1802877 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content69% 
IMG OID644975814 
Productpredicted transcriptional regulator 
Protein accessionYP_003133596 
Protein GI257055764 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.697974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACTGC TGACGAACCC CCACTCCGCC TGCACACTGG ACTCCTGGAC AGCACAGGGG 
AGGCAGGACA TGCAGCACTT CGGAGCCAAC CTCCGCCGTA TCCGCACCGC ACGAGGCAAG
TCCCTCGACG TCGTCGCCGG GCTCGCGGGC ATCAGCCCCA GCTACCTCTC CCGCATCGAA
CGTGGCGAAC GCGCCCTTGA TCGCCGATCG TTGATCGCCG CGCTCGCGCG TGCCCTCGAC
GTCACTCCCG CCGACATCGT CGGACCCGCT ATACCCGTCA CCGCCGACAC CGGCGTCGCC
GACGACCAGG TGGACGCTGT GCGCGCTGCT CTCCTTGCCG TGAGCGTCGG CATTCCCGGG
GGAGACGTCG TATCGTGCGA CGTCCTCCGG AGCCGCGCTC ACATCCTCCT GAACGCGCAG
CGCGATTGCG ACTACCGGAC AGTGGGGGAA TCCCTGCCCC AGCTCATCCG TGACGTTCAT
GCGTCGATCC AGGCGGGAAG AGACGTTCGC GAGCTGCTCC GACTCGCGGT GATGCTGCAC
GTGCAGGGCA CGGCCGCGTG GCTCGGTGAC ATCGGCGGTC CCAGTGACCT GGCATGGATT
GCGACCACTC TCGCCCGCGA TGCCGCGCAG CGTGCCGAAG ACCCCACCAG CATCGCGATC
GCGAGCTTCG GGGTCGGCTT GGGATTGTTG GGCGAAGGGG CTTTCGAACT CGCCTCACAC
GTCATCACGG CAGCCGATCC CGGCACAGCA TCTCCCGGCG GTCTCCATCT CTCCGGCATG
TTGGCGCTCG CTTACTCGCT CACCGCAGCA GCACAGGGCG ACACCACCTC CGAGACGGCC
GCACTGGACC ACGCCACTGA CCTCACACAG CACGTCGACG GCGACTACGG ATGGTTCGGG
TTCGGGGCAG CGAACGTCAA CCTGTGGCGC GCCTCGGCGG CACTGGAACG CGGAGATCAC
GCCACAGCCG CGTCCCTCAC CGACCGCATC GAACCCGACT CGCTCCCCAA CCCCACACGT
CGAGTGGCCT ACTACCTCGC CCGTGCCCGT GCCTGCGCAC GCCTCCGGCA CCGGCGTTCC
GACGCCGTGG ACGCCCTCCG CGCAGCCGAG AGAATCGCAC CCGCGCGAGT CCACGGCTCA
CGAGTCGCGA GGGGCCTGGT GGTCGAGCTG AGCGAGCGAG CACGGGCGGA CGTCGTCGGT
GCTGAACTAC GCGGCCTCGC CTCACGCGCC GGACTGGACC TGTAG
 
Protein sequence
MGLLTNPHSA CTLDSWTAQG RQDMQHFGAN LRRIRTARGK SLDVVAGLAG ISPSYLSRIE 
RGERALDRRS LIAALARALD VTPADIVGPA IPVTADTGVA DDQVDAVRAA LLAVSVGIPG
GDVVSCDVLR SRAHILLNAQ RDCDYRTVGE SLPQLIRDVH ASIQAGRDVR ELLRLAVMLH
VQGTAAWLGD IGGPSDLAWI ATTLARDAAQ RAEDPTSIAI ASFGVGLGLL GEGAFELASH
VITAADPGTA SPGGLHLSGM LALAYSLTAA AQGDTTSETA ALDHATDLTQ HVDGDYGWFG
FGAANVNLWR ASAALERGDH ATAASLTDRI EPDSLPNPTR RVAYYLARAR ACARLRHRRS
DAVDALRAAE RIAPARVHGS RVARGLVVEL SERARADVVG AELRGLASRA GLDL