17 homologs were found in PanDaTox collection
for query gene Avin_46500 on replicon NC_012560
Organism: Azotobacter vinelandii DJ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007912  Sde_3284  hypothetical protein  51.44 
 
 
736 aa  719    Saccharophagus degradans 2-40  Bacteria  normal  0.924939  normal  0.314545 
 
 
-
 
NC_008345  Sfri_3104  heparinase II/III family protein  47.99 
 
 
760 aa  641    Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.220096  n/a   
 
 
-
 
NC_008347  Mmar10_0256  heparinase II/III family protein  50.62 
 
 
722 aa  691    Maricaulis maris MCS10  Bacteria  normal  0.627284  normal 
 
 
-
 
NC_012560  Avin_46500  alginate lyase  100 
 
 
742 aa  1495    Azotobacter vinelandii DJ  Bacteria  normal  0.481088  n/a   
 
 
-
 
NC_011071  Smal_2067  Heparinase II/III family protein  57.71 
 
 
744 aa  796    Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.720952  normal 
 
 
-
 
NC_014230  CA2559_11508  putative chondroitin AC/alginate lyase  40.89 
 
 
759 aa  572  1.0000000000000001e-162  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.0906796  n/a   
 
 
-
 
NC_008228  Patl_3651  heparinase II/III-like  40.54 
 
 
748 aa  548  1e-154  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.324454  n/a   
 
 
-
 
NC_013501  Rmar_1166  Heparinase II/III family protein  43.18 
 
 
741 aa  512  1e-143  Rhodothermus marinus DSM 4252  Bacteria  normal  0.307073  n/a   
 
 
-
 
NC_010465  YPK_3711  heparinase II/III family protein  24.07 
 
 
672 aa  108  3e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3577  heparinase II/III-like family protein  24.07 
 
 
672 aa  108  3e-22  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A4014  hypothetical protein  24.07 
 
 
672 aa  108  4e-22  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0489  heparinase II/III family protein  22.44 
 
 
622 aa  63.5  0.00000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3334  Heparinase II/III family protein  35.95 
 
 
1064 aa  53.9  0.00001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.503673 
 
 
-
 
NC_009954  Cmaq_1891  heparinase II/III family protein  24.03 
 
 
968 aa  45.4  0.003  Caldivirga maquilingensis IC-167  Archaea  normal  normal  0.857248 
 
 
-
 
NC_013061  Phep_2654  hypothetical protein  22.69 
 
 
847 aa  45.4  0.004  Pedobacter heparinus DSM 2366  Bacteria  normal  0.246589  normal 
 
 
-
 
NC_013061  Phep_0331  Heparinase II/III family protein  22.88 
 
 
1005 aa  44.7  0.007  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3344  hypothetical protein  23.81 
 
 
1064 aa  44.3  0.008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854403  normal 
 
 
-
 
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