Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3711 |
Symbol | |
ID | 6091281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4098545 |
End bp | 4100563 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598799 |
Product | heparinase II/III family protein |
Protein accession | YP_001722431 |
Protein GI | 170025926 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGT TTACGGATCG GCAGATGGTT AAAATCCGCC AGCGCGTTGT GAAACAACCG GAGATTATTG CCACGCTGAT CGCCGATAAT CAGGTGGTTT TAGAGACCGA CACACTGGTG CCCGCCACCG GTATCGCCAC CTGGAATCAT TACTATTATT GCCCTGAGCA TGGTGTCCAG TTGGTATGGG ATCGCTTTTC ACCTCAAGCA CACCGCTGTC CGGTAGATGA TCATCTTTTT AGCGGCGAAC CCTACGACGG TGCCTGGTGG CGGGCATTAA ATGGTTTGAA CGCCAAAGCC TGCAATCAAC TGGGCTTGCT GTGGCAATTA ACCGGAGAAA TACGTTACTT CGATAAGGTG CGGGACATTC TGATGAGTTA TGCCCGCTAC TACCCTGACT ATGAAGTCCA CGGTGGTATT CCTTATAACG GGCCGGGTAA GGCGAATGCA CAGACCCTGT GTGAGGCAAA CTGCCTCCTT GATTTTGCCT TGGGCTATGA CTTTATCGCT GATACGCTCA GCCAAGAGCA ACGTGATTGT CTTGCTGAGC GCTTATTGCG GGTGGGCGCT GATTTCTTAA TGCAACACCG TACCCGTCAG TTGCACAACC ATGAAGTTAA AATCAGTAGC GCTATCGCGG TTATTGGCCT GATCCTTGAA GAGGAGCACT ACATTGAGTT TGCGGTTAAC GCAGATTACG GCCTGCGCTA CCAGTTAGAG CATGGCTTAT TCAACGAAGG GCTGTGGTTT GAAGGCTCGG TGCATTATCA CTTTTATGCA CTGCAAGGTT TTTGGTCATT TGAAAAACTG GCGGCCGGTA GCCGCTATAG CCTACTGGCG CTGCCCTATT ACCGCGACAT GCTCAGCTTC CCGCTCAAGC TGCTGATGCC CAACGGCACA TTCCCGCGCA TTAATGATTG TACCGCCGGG CAAGAGCAAC TTAATCATGC GCATCTGTAT GAATTTGCTT ATCAGATCTA CGGCAACCGT GAATATGCGG CGGCCCTGCA ACATATTTAT CGCCAGCAAC CCCGTTTAAA TCTGGATGCA CTGCTGTATG GGGCTGAATC ATTACCACTG CAAATTATTG ATGTCATCCC GACCGATACA CTACATGCAC CAGATTGCGG ATTAACCATC CTACGCCAAC CGCAGGCCAG CCGCGCATTG TTGATAAAAC ACAGCCCGTA TGGCGGCGAG CATGATCATT ATGATCGGCT AAATTTAATT CTGTTTGACA GGGGCCACGA AGTCCTGCCC GATTTAGGCA CCACCGGTTA TGGTGCACAG CGACATTATG ACTATTACAA AAACAGCGCC ACTCACAATA CGCTCAGTAT CAACCAAAAA AATCAGCCTC CTGCAGTGCC TTACATCCGT CAATGGCATC AGGCAGCAAA CTTCAGTTGG CTGGATACCG AAGTCGATTG GCGTCAAACC GCGCCTGAGT TAGACAGCCA TACCCGCGTA CAATGGGATG AAGCGTCTTA TCGTGATGTT AAATTCCGCC GCCGTATTTT ATGGCTGGAA GATACGATTA TCGATATTAG CAATATCGTT AATCCCCATC AGCAGTCGTG GAACTGGACG CTGTATATTG ATGGGACTGC GACAGAACAG AAAGGTGAAA TGACGTCCTT CGGTGACAGC GGCCCGATGC AGTATGTGCA TCAGGTGACC GCCCAACCAC TAAATGGGGT GATACCGTGC CGTTACCAAA CCACAGCACG CCCACTGACA CTGTGGTTAG CCGCTGATGC CACGCTATTT CAAGGGCTGG CCCCGGCGAA TCCGTCGGTA CGTGATCTCA GCTACCTGAT GTTACGCAAC CAACAACCAG CAGCTCAGGT CACCTGTGTT TTTGACTTGA ATGACAGTAA CCCGTTACTG CACGTTGAGG TGGAAACTAA CGGCGAAATA TTATCAATAG AATTAATCCG CCAACAGCAA ACCATGCGGA TAAACCTTCC TTTAACCAGC AACCAACTGC CGCAATTTAG CCAGGCGTAT CCATCTTAG
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Protein sequence | MKQFTDRQMV KIRQRVVKQP EIIATLIADN QVVLETDTLV PATGIATWNH YYYCPEHGVQ LVWDRFSPQA HRCPVDDHLF SGEPYDGAWW RALNGLNAKA CNQLGLLWQL TGEIRYFDKV RDILMSYARY YPDYEVHGGI PYNGPGKANA QTLCEANCLL DFALGYDFIA DTLSQEQRDC LAERLLRVGA DFLMQHRTRQ LHNHEVKISS AIAVIGLILE EEHYIEFAVN ADYGLRYQLE HGLFNEGLWF EGSVHYHFYA LQGFWSFEKL AAGSRYSLLA LPYYRDMLSF PLKLLMPNGT FPRINDCTAG QEQLNHAHLY EFAYQIYGNR EYAAALQHIY RQQPRLNLDA LLYGAESLPL QIIDVIPTDT LHAPDCGLTI LRQPQASRAL LIKHSPYGGE HDHYDRLNLI LFDRGHEVLP DLGTTGYGAQ RHYDYYKNSA THNTLSINQK NQPPAVPYIR QWHQAANFSW LDTEVDWRQT APELDSHTRV QWDEASYRDV KFRRRILWLE DTIIDISNIV NPHQQSWNWT LYIDGTATEQ KGEMTSFGDS GPMQYVHQVT AQPLNGVIPC RYQTTARPLT LWLAADATLF QGLAPANPSV RDLSYLMLRN QQPAAQVTCV FDLNDSNPLL HVEVETNGEI LSIELIRQQQ TMRINLPLTS NQLPQFSQAY PS
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