| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3104 |
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| Symbol | |
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| ID | 4280007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3714760 |
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| End bp | 3717042 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135923 |
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| Product | heparinase II/III family protein |
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| Protein accession | YP_751780 |
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| Protein GI | 114564266 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.220096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT TCAATCTAGC GGCCGGCGTA AGCCCGATGA CACGTATCAT TAAGCAGGCA
GGAAAAATAG CACTATTGGC GTCAATAACG TGCGCTATTT CATTACCCGT TATGGCTGCG
CAACATCCAA ACTTAGTCAT AAACCAGCAA GATGTGGCAG CCATGAAACA GGCCATCACT
CAACCTGGGT CATTTCAAAA TGCATTCAAT ACCACGCAGA GCAATGTGGA CAAAGGACTG
GATCAGCCAA TTGAAGTGCC AGTACCCAAA GATGCAGGTG GTGGTTATAC CCACGAAAAA
CATAAAAGTA ATTACCAACA AATGTATGAC ACTGGCATTA TTTATCAGCT GACTGGCGAT
AAAAAATATG CCGAATACGT TAAAGACATG CTGTTGCAAT ATGCCACACT TTACCCAACA
CTACCTTTGC ACCCTATGCG TAAAAGCAAC AATGAAGGTA AACTTTTCTG GCAAGGACTC
AATGAAGCAG TTTGGTTAGT ACATACCATT CAGGCGTACG ACTTTATCTA TGATGCGTTA
ACACCTGCAG AACGTAATAC CATCGAAACG GGTGCAATAA TACCCGCTGC ACTCTTTTTG
TCAGAACAAT CTCCGCACAC CTTTAATAAG GTGCATAACC ACGGCACTTG GGCCACTGCT
GCTGTTGGTA TGAGTGGATA TGTACTCGAT AAGCCACTTT GGGTTGAACG TGCATTGTAC
GACTTAAATC TCGCCAAAAA AGGCGGTTTT ATGCGTCAGT TGGACGAATT GTTTTCACCA
GACGGTTATT ACAATGAAGG GCCATATTAT CAACGTTATG CATTAATGCC ATTTGTAACT
TTTGCTAAAG CCATTGAGCA AAATGAACCG CAGCGTAAGA TTTTTCAATA CCGTGACGGT
ATATTACTTA AAGCTATTAC GAGTACGGTT GAACTCAGTT ATAACAAACT GTTTTTCCCG
CTTAACGATG CGATTAAAAG CAAAGGCATC GACACTATTG AACTCGTCAA CGGCGTCGCC
ATTGCTTATG GTCTCAACGG CGATCCACGT TTATTAGATA TTGCTCAGCA ACAACACAAT
ATTTTATTAA CGGGTGATGG GCTCAAAGTT GCACAAGGGT TAGACAACAA ACTACAACAG
CCCTTTCCAT TCGTTTCGAC ATTATTCCGT GATGGCCAAC AAGGTGATGA CGGTGCATTA
GTGGTTATGC GTCAAGGTAA AGCAACTGAC CAAGCCATTG TATTTAAAGC AACCGCTCAA
GGTTTAGGTC ATGGCCATTT TGATAAGTTA ACGTGGCAGT TTTACGATGC AGGTAATGAA
ATCGTATCCG ATTATGGCGC TGCACGTTTT CTAAATGTAG AGGCAAAATT TGGTGGCCGT
TATTTACCTG AAAATGAATC GTGGGCTAAA CAAACCATTG CCCATAACAC TTTAATTGTT
GACGAGAAAA GTCATTTTAA TGGCAAGCTT AAAGCGGCTA ACAAAAATAA CCCGACATTA
CACTTCTACT CAGCAAAGCA AGACCTCACC ATCGCGTCGG CTTCTATCGA CACCGCTTAT
GATGATGTCG CGTTTAAGCG CACTCTCGCC TTAGTCAACA TCAAACAACG TGATGCGGTA
ATTGGTATCG ATATAATGCG TGTTACGGCT AACAAGCCAC ATCAATACGA CTTACCAGTG
CATTATCAAG GGCAATTAAT CGATACCAAC TTTGACAGAC AGGCGTCACT GACTCAATTG
TCTGCTTTGG GTACCGAAAA TGGTTACCAA CATCTATGGT TGTTAGCAAC TGCTAACCTA
GCCAAAGACA AAGCCGCTAA TAAACTGGCT AAAGTCACTT GGTTAAATGA TAACGGCCAT
TTTTATACCC ATAGCACGTT AGTCAATACT AACTTCAACA ATGCCACTAA CGAGCAAATG
TTATTCACCC AATTGGGTGC CAACGATCCG GATATGAACT TACGCCAACA GCAGTCGTTC
ATTCACCGAG TGAATGCCAC TAATCATACT TATGTCAGCG TGATGGAGCC ACACGGCGAG
TACAACCCAT CAAAAGAATA CACTCTAGAA GCCACCAGCA ATATTGCAGG GCTGATTCAT
CATCAACAAG CTGAACTAGA AGCGGTGCAA ATACGCTTTA CCGATGGACA ACAATATCTA
TTAGCAATCA ACCACGCTGA TAACGCTGTG ACTCAAGAAA CACAAAGTGT CATTAGCGTC
AACGGGGTGC AATACCCGTT TAGCGGACGC GCCGAATTAT TAGACATTAA AGAATCCAAG
TAA
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| Protein sequence | MKNFNLAAGV SPMTRIIKQA GKIALLASIT CAISLPVMAA QHPNLVINQQ DVAAMKQAIT
QPGSFQNAFN TTQSNVDKGL DQPIEVPVPK DAGGGYTHEK HKSNYQQMYD TGIIYQLTGD
KKYAEYVKDM LLQYATLYPT LPLHPMRKSN NEGKLFWQGL NEAVWLVHTI QAYDFIYDAL
TPAERNTIET GAIIPAALFL SEQSPHTFNK VHNHGTWATA AVGMSGYVLD KPLWVERALY
DLNLAKKGGF MRQLDELFSP DGYYNEGPYY QRYALMPFVT FAKAIEQNEP QRKIFQYRDG
ILLKAITSTV ELSYNKLFFP LNDAIKSKGI DTIELVNGVA IAYGLNGDPR LLDIAQQQHN
ILLTGDGLKV AQGLDNKLQQ PFPFVSTLFR DGQQGDDGAL VVMRQGKATD QAIVFKATAQ
GLGHGHFDKL TWQFYDAGNE IVSDYGAARF LNVEAKFGGR YLPENESWAK QTIAHNTLIV
DEKSHFNGKL KAANKNNPTL HFYSAKQDLT IASASIDTAY DDVAFKRTLA LVNIKQRDAV
IGIDIMRVTA NKPHQYDLPV HYQGQLIDTN FDRQASLTQL SALGTENGYQ HLWLLATANL
AKDKAANKLA KVTWLNDNGH FYTHSTLVNT NFNNATNEQM LFTQLGANDP DMNLRQQQSF
IHRVNATNHT YVSVMEPHGE YNPSKEYTLE ATSNIAGLIH HQQAELEAVQ IRFTDGQQYL
LAINHADNAV TQETQSVISV NGVQYPFSGR AELLDIKESK
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