Gene Phep_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2654 
Symbol 
ID8253761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3107776 
End bp3110319 
Gene Length2544 bp 
Protein Length847 aa 
Translation table11 
GC content39% 
IMG OID644936301 
Producthypothetical protein 
Protein accessionYP_003092917 
Protein GI255532545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.246589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA AAGACATTTT AAAAATACTT TTTGTAAGCT TAGCCCTTAT TTATTGTGTT 
CAGGTAAAGG CGCAAAATGC AGGTATTATA CCTTCTTATA ATTATTCCCA AATAACGGAA
CATCCCAGGC TTTTACTGGT CAAAGGAGAA GAAAATGCTT TAAAAGCATC GATCCAAAGA
AATCCGGAGT TTAAAATCGT AGATACCTAT ATCAGGCAGG TGGCAGATCA ACTGCTTTCT
GAAAAGCCTT TGGTGTTTAA AAAAGATGGT AAAAGACTGC TGGCAGTTTC CAGAAAAGCA
CTTACAAGGT TATATTATCT GTCTTACAGT TACCGGATAT CAAAAGATAT CAAATACCTG
AACAGGGCGG AAACAGAGCT CAATGCCATT TGTGATTTTG AAAGTTGGAA TCCTTCACAT
TTTTTAGACG TAGGGGAAAT GTGTATGGCT GTTTCTTTAG CGTATGACTG GTTATACAGT
GATTTAAAGG AAAGTACGAA AAAAAATGTG CGCAAAGCGA TTCTGGAAAA AGCCTTTGCC
CCTTCCTACG TAAAAGAAGA TGCCTGGTTT TTGGAAAGAA ACAACAACTG GAACTCTGTT
TGTAATGCTG GCCTGGTGTA CGGGGCCCTG GCCATTTTAG AAGATGAAAA AGAGCAGTCG
GTAGCCATTA TTGAACGGGC TTTAAAATCC AATGTTTTAC CATTACAGGC TTATGCACCA
GATGGAAATT ATCCCGAAGG ACCAGGTTAC TGGAACTATG GTACCTCGTT CCAGGTGATG
TTGTTTGCTG CATTGGAAAG CGCATTCGGC TCTGATAAAG GTTTGTCCAA AGCTCCTGGT
TTTATGGCTT CCGCCCATTA CATGGCCTTC TCTTCTGGGC CATCAGGAAA TTACTTCAAC
TATTATGATT GTGGAAGAGA GATTACTTCA TGTTCTTCTA TGTTTTGGTT TGCAAACAAA
TTAAACGATC CATCATTGAT ATTTCCAGAA ATAGCTTTAA TCAACAATGG CGTGTATACC
CGTGCAGATC AGTCTGATAT TGAACGGATT TTACCCAATG TACTTATTTT TGGGAGAGAC
CTGACTTTAT CAAAAGTAAA GTTACCATCA AAACAAATAT TTACAGGACA TGGAATTACA
CCCGTTGCTA TTGTACGTAC AAATTGGGAA AGCGGAGCGG GTAAATTTTT AGGAATTAAA
GGGGGCAGCG CTGCTGACGG ACATGCGCAC ATGGATCAGG GAACGTTTGT ATACGATGTT
GGCAGATTAA GATGGGCCAT GGATTTCGGG ATGCAGAGCT ACATCACGAT GGAATCTAAA
GGTGTAGACC TATGGAACAT GGCCCAGAAT TCTCAAAGAT GGGATATCTT CAGGTACAAT
AATTTGAATC ATAATACCCT AAGTATCAAC AACCAACGTC ATAATGTTAG TGGCAGGGCT
GAAATTATTG AAGCTTTTGA AAATAAGAAT GAGCTGGGTG CCAAGCTAGA CCTAAAGTCC
GTCTTGAATT TTAACGATGA ATTGAAAACT GCCACCAGGA AAGCCAGCAT CATAGACGAT
TCGTATTTGA AAATAGAAGA TTTTGTGGAA ACAAATGCCA AACCTGTAGA CTTAAGATGG
AACATGGTTA CCCCTGCCCT GGCTCAGATT GTCGATAAAA ATACCATTAA ACTTTCCCAG
CAGGGAAAAA CCATGTTTTT GAAGTTCAAC GCCGATGTTC CGTTTAAACT AGTCATCCGA
CCTTCGGAAA ACCCCAGCCA ATACAAATGT GAGTTTGGAG ATTACAAGTA TGGCGATTAC
AACCAGCAAA ATAAGGGGAC AGTGATGCTT GGCTTTGATT CAAAAATCCC GGCGAATAAA
GCTGCCAGGT TTACGGTGAC ACTTGTAGAA GGGAAACCAG ATATGTTATT GAAAAAGAAC
ACCATCATTC TTGATGCTCC AGACCCTAAT ACTGCATCTT ATGGAAGTAA TGTTTTTTAT
GATGTTTCTC CTATCGGCGT TAGCAGCACA GGTGAGTTAT ATCCAATTGA AACTCCAGAC
TGGAATATTT ATGGCCATGT AGACGTAAAA AACCTGTTTG ATAAGGTTTT TAAATTTCGG
ATTGATGCTA AAAGAATTAC TGCAGCAGGG ATTGTTAATA CCGGAATTGA TAGATCTTTG
AATGGGCAGT TGGGTGTTAG AGGGGGGGAA AGTACTGGAA TTGATAAAAA TGAAGGATAC
CTGCTGAGTC TTGATTTAAG GGATTTAGCG ACTTCGGTAA CGATTGAGCT TACAAAAATT
GGTTTTACTT ACCTGGATGC TTCAGAATCT TGTACGCTTG TTAATCGTCA AAATCCGGGA
AAGATGATGG TGTTTACTGG AAATGATAGT AAAAAAATAG AAGAGGTTAA AATAACATCC
GTCCATAAAA GACAATTTGT AGATGTTTCC AGTTTGGGCA TTTCCTTCAA AGGTGGTTCA
GATAATCCAG AGTTTTTGTC GTTTTTTAAT ACCGGCGATA AAGGAAATTT TAGAGTATCT
GGTTTTGAGT TTATAGTAAA GTAA
 
Protein sequence
MKVKDILKIL FVSLALIYCV QVKAQNAGII PSYNYSQITE HPRLLLVKGE ENALKASIQR 
NPEFKIVDTY IRQVADQLLS EKPLVFKKDG KRLLAVSRKA LTRLYYLSYS YRISKDIKYL
NRAETELNAI CDFESWNPSH FLDVGEMCMA VSLAYDWLYS DLKESTKKNV RKAILEKAFA
PSYVKEDAWF LERNNNWNSV CNAGLVYGAL AILEDEKEQS VAIIERALKS NVLPLQAYAP
DGNYPEGPGY WNYGTSFQVM LFAALESAFG SDKGLSKAPG FMASAHYMAF SSGPSGNYFN
YYDCGREITS CSSMFWFANK LNDPSLIFPE IALINNGVYT RADQSDIERI LPNVLIFGRD
LTLSKVKLPS KQIFTGHGIT PVAIVRTNWE SGAGKFLGIK GGSAADGHAH MDQGTFVYDV
GRLRWAMDFG MQSYITMESK GVDLWNMAQN SQRWDIFRYN NLNHNTLSIN NQRHNVSGRA
EIIEAFENKN ELGAKLDLKS VLNFNDELKT ATRKASIIDD SYLKIEDFVE TNAKPVDLRW
NMVTPALAQI VDKNTIKLSQ QGKTMFLKFN ADVPFKLVIR PSENPSQYKC EFGDYKYGDY
NQQNKGTVML GFDSKIPANK AARFTVTLVE GKPDMLLKKN TIILDAPDPN TASYGSNVFY
DVSPIGVSST GELYPIETPD WNIYGHVDVK NLFDKVFKFR IDAKRITAAG IVNTGIDRSL
NGQLGVRGGE STGIDKNEGY LLSLDLRDLA TSVTIELTKI GFTYLDASES CTLVNRQNPG
KMMVFTGNDS KKIEEVKITS VHKRQFVDVS SLGISFKGGS DNPEFLSFFN TGDKGNFRVS
GFEFIVK