17 homologs were found in PanDaTox collection
for query gene Svir_17140 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013159  Svir_17140  CRISPR-associated protein, Cse1 family  100 
 
 		 525 aa  1063    Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_1592  CRISPR-associated Cse1 family protein  40.65 
 
 		 549 aa  308  1.0000000000000001e-82  Thermobifida fusca YX  Bacteria  normal  0.440854  n/a   
 
 
-
 
NC_009953  Sare_1972  CRISPR-associated Cse1 family protein  40.59 
 
 		 495 aa  292  9e-78  Salinispora arenicola CNS-205  Bacteria  normal  0.355127  normal  1 
 
 
-
 
NC_013510  Tcur_0942  CRISPR-associated protein, Cse1 family  38.95 
 
 		 722 aa  291  2e-77  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_13870  CRISPR-associated protein, Cse1 family  36.13 
 
 		 484 aa  246  6.999999999999999e-64  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.578004  normal  0.601258 
 
 
-
 
NC_012560  Avin_17180  hypothetical protein  31.4 
 
 		 516 aa  95.9  2e-18  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_17350  CRISPR-associated protein, Cse1 family  28.82 
 
 		 567 aa  80.1  0.00000000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008554  Sfum_2825  CRISPR-associated Cse1 family protein  25.84 
 
 		 517 aa  79.3  0.0000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_3019  Cse1 family CRISPR-associated protein  28.54 
 
 		 516 aa  77.4  0.0000000000006  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.00000306277  normal  0.0835975 
 
 
-
 
NC_009439  Pmen_3760  CRISPR-associated Cse1 family protein  28.45 
 
 		 525 aa  75.9  0.000000000002  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.33895 
 
 
-
 
NC_013124  Afer_0988  CRISPR-associated protein, Cse1 family  28.85 
 
 		 540 aa  70.9  0.00000000006  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_1230  CRISPR-associated protein, Cse1 family  24.89 
 
 		 561 aa  55.1  0.000003  Meiothermus silvanus DSM 9946  Bacteria  unclonable  0.00000214368  normal  0.502097 
 
 
-
 
NC_008609  Ppro_2342  CRISPR-associated Cse1 family protein  24.56 
 
 		 506 aa  50.8  0.00006  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_013526  Tter_1896  CRISPR-associated protein, Cse1 family  24.9 
 
 		 533 aa  49.7  0.0001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.189081  n/a   
 
 
-
 
NC_011729  PCC7424_2439  CRISPR-associated protein, Cse1 family  21.17 
 
 		 525 aa  47  0.001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008010  Dgeo_2630  CRISPR-associated Cse1 family protein  26.39 
 
 		 573 aa  46.2  0.002  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0018  hypothetical protein  28.24 
 
 		 550 aa  44.3  0.006  Frankia sp. CcI3  Bacteria  normal  0.830051  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>