28 homologs were found in PanDaTox collection
for query gene Mlg_0088 on replicon NC_008340
Organism: Alkalilimnicola ehrlichii MLHE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008340  Mlg_0088  TetR family transcriptional regulator  100 
 
 
223 aa  436  1e-121  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2820  TetR family transcriptional regulator  45.63 
 
 
213 aa  159  3e-38  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.848786  n/a   
 
 
-
 
NC_006369  lpl1141  hypothetical protein  39.66 
 
 
203 aa  148  6e-35  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp1136  hypothetical protein  39.66 
 
 
203 aa  148  7e-35  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007614  Nmul_A1779  TetR family transcriptional regulator  44.89 
 
 
206 aa  148  8e-35  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.787472  n/a   
 
 
-
 
NC_009439  Pmen_4516  hypothetical protein  47.37 
 
 
193 aa  139  5e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_00440  Transcriptional regulatory protein TetR family  44.33 
 
 
188 aa  126  2e-28  Azotobacter vinelandii DJ  Bacteria  normal  0.152406  n/a   
 
 
-
 
NC_013947  Snas_1335  transcriptional regulator, TetR family  40.22 
 
 
194 aa  58.9  6e-08  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.293374 
 
 
-
 
NC_014148  Plim_0557  regulatory protein TetR  27.62 
 
 
251 aa  46.2  0.0004  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3083  regulatory protein TetR  37.29 
 
 
248 aa  45.1  0.0008  Gordonia bronchialis DSM 43247  Bacteria  normal  0.143154  n/a   
 
 
-
 
NC_012669  Bcav_3884  transcriptional regulator, TetR family  32.35 
 
 
304 aa  44.7  0.001  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.162563 
 
 
-
 
NC_009338  Mflv_4355  TetR family transcriptional regulator  35.71 
 
 
244 aa  44.3  0.002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.589486  normal 
 
 
-
 
NC_008726  Mvan_1989  TetR family transcriptional regulator  35.71 
 
 
250 aa  43.9  0.002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0441  TetR family transcriptional regulator  45.76 
 
 
233 aa  43.5  0.003  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0059  TetR family transcriptional regulator  35.29 
 
 
197 aa  43.1  0.003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.227701 
 
 
-
 
NC_008752  Aave_0109  TetR family transcriptional regulator  36.63 
 
 
207 aa  42.7  0.004  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2773  TetR family transcriptional regulator  42.19 
 
 
295 aa  42.7  0.004  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00136461  normal  0.297144 
 
 
-
 
NC_008554  Sfum_3459  TetR family transcriptional regulator  25.7 
 
 
324 aa  42.7  0.004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  hitchhiker  0.000855252 
 
 
-
 
NC_013757  Gobs_1909  transcriptional regulator, TetR family  38.1 
 
 
209 aa  42.4  0.005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0574085  n/a   
 
 
-
 
NC_010084  Bmul_1719  TetR family transcriptional regulator  42.19 
 
 
272 aa  42.7  0.005  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.7573  hitchhiker  0.00027252 
 
 
-
 
NC_009664  Krad_4458  transcriptional regulator, TetR family  34.78 
 
 
263 aa  42.4  0.005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0794126 
 
 
-
 
NC_007651  BTH_I2528  TetR family transcriptional regulator  36.96 
 
 
317 aa  42  0.007  Burkholderia thailandensis E264  Bacteria  normal  0.0660251  n/a   
 
 
-
 
NC_009077  Mjls_0679  TetR family transcriptional regulator  36.92 
 
 
197 aa  41.6  0.009  Mycobacterium sp. JLS  Bacteria  normal  0.192454  normal 
 
 
-
 
NC_008705  Mkms_0699  TetR family transcriptional regulator  36.92 
 
 
197 aa  41.6  0.009  Mycobacterium sp. KMS  Bacteria  normal  0.682068  normal  0.380548 
 
 
-
 
NC_008146  Mmcs_0686  TetR family transcriptional regulator  36.92 
 
 
197 aa  41.6  0.009  Mycobacterium sp. MCS  Bacteria  normal  0.863349  n/a   
 
 
-
 
NC_009565  TBFG_10333  TetR/AcrR family transcriptional regulator  37.29 
 
 
200 aa  41.6  0.01  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3457  TetR family transcriptional regulator  33.33 
 
 
238 aa  41.6  0.01  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4675  TetR family transcriptional regulator  40.62 
 
 
273 aa  41.6  0.01  Burkholderia sp. 383  Bacteria  normal  normal  0.104564 
 
 
-
 
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