Gene Avin_00440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_00440 
Symbol 
ID7759011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand- 
Start bp44213 
End bp44779 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content71% 
IMG OID643802970 
ProductTranscriptional regulatory protein TetR family 
Protein accessionYP_002797286 
Protein GI226942213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.152406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGTG CCGCGCAGAT TCTCGATACC GCCCTGCAGA TCGCCGAGCG CAGCGGCTGG 
GAACGTCTGC GCCTGTTCGA CGTGGCCGCC ACGCTGGATA TCGGGCTGGA CGAGATCGCC 
CGCCACTACC GGGACAAGGA TGCCCTGGTG GAGGCTTGGT TCGACCGGGC CGACGCCGCC 
CTGCTCGCCC GGGCCCGGGA CGCCGACTTG GCGGCGATGA CGCCCGCCGG CCGGTTGGAG 
GAACTGCTGG TGGCCTGGTT CGCCGCGCTG GCCCCGCACC GGGCCCTGAC CGGGGAGATG 
CTGTGCTACA AGCTCGAACC CGGCCATATC CACCTGCAGG CGCAGGGGCT GATGCGCATC 
AGCCGCACGG TGCAGTGGTG GCGCGAGGCG GCCGGACGGA GCGACGCCTG GCTTGCGCGC 
ATCGGCGAGG AATGCGCGCT CAGCGCCGTC TATCTGTGCA CCTTCGCCCA CTGGCTGCGC 
CATCGCCGGG AGGACGAAGC GGCGCTGCGC GTCTACCTGC GTCGGCGCCT GCACAGCCTG 
CCGCTGGCCT GCCTGCTGCG GCCTTGA
 
Protein sequence
MTSAAQILDT ALQIAERSGW ERLRLFDVAA TLDIGLDEIA RHYRDKDALV EAWFDRADAA 
LLARARDADL AAMTPAGRLE ELLVAWFAAL APHRALTGEM LCYKLEPGHI HLQAQGLMRI 
SRTVQWWREA AGRSDAWLAR IGEECALSAV YLCTFAHWLR HRREDEAALR VYLRRRLHSL 
PLACLLRP