Gene Gobs_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGobs_1909 
Symbol 
ID8753580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeodermatophilus obscurus DSM 43160 
KingdomBacteria 
Replicon accessionNC_013757 
Strand+ 
Start bp1976923 
End bp1977552 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003408983 
Protein GI284990429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0574085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCGA TCGAGAACGG CTCCCGGGTC CGGCGCGGCC GCCCGGGTCA CTCGCTGGAC 
TCCCTGCTCG ACGTCGCCGT CGCCGTCTTC AACGAGCGCG GCTACGACGC GACGAGCATG 
GAGGAGCTGG CCACGCGGCT CGGCGTCACC AAGTCGGCGA TCTACCACCA CGTGTCCAGC 
AAGGTCGAGC TGCTCCGCCT GGCACTCGAC CGGGCCCTGG ACGCGCTGTT CGCCGTCACG 
GAGGAGCCGG GCGCCACCAG TGGGCCGGCC ATCGACCGCC TCGAGCACGT CGTCCGCGGC 
TCGGTGCGCG TGCTCGCCGC CGAGCTGCCG TTCGTGACCC TGCTGCTGCG GGTGCGCGGC 
AACTCCCCGG TCGAGCAGGC GGCCCTCCAA CGGCGTCGTC GGTTCGACCG CGTCGTGACC 
GACCTGGTAC GCGCCGCGGA GGAGGAGGGC GACGTCCGCC CCGACGTCGA CCCCGCCATC 
ACCAGCCGCC TGCTGTTCGG CACGGTCAAC TCGCTGACCG AGTGGTACCG GCCGGACGGC 
GGCCTGTCCG CCGACGACCT CGCCGACGCG CTCGTCGCCA CGACCTTCCA GGGCCTGCGC 
GCCCGGCCCG CCCCGACGCC ACCGTCCTGA
 
Protein sequence
MTSIENGSRV RRGRPGHSLD SLLDVAVAVF NERGYDATSM EELATRLGVT KSAIYHHVSS 
KVELLRLALD RALDALFAVT EEPGATSGPA IDRLEHVVRG SVRVLAAELP FVTLLLRVRG 
NSPVEQAALQ RRRRFDRVVT DLVRAAEEEG DVRPDVDPAI TSRLLFGTVN SLTEWYRPDG 
GLSADDLADA LVATTFQGLR ARPAPTPPS