12 homologs were found in PanDaTox collection
for query gene Tbd_1457 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007404  Tbd_1457  hypothetical protein  100 
 
 		 78 aa  155  1e-37  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.897377  normal  1 
 
 
-
 
NC_002977  MCA1031  ribosomal subunit interface protein, putative  40.26 
 
 		 119 aa  53.5  0.0000009  Methylococcus capsulatus str. Bath  Bacteria  normal  0.248083  n/a   
 
 
-
 
NC_007413  Ava_4090  cold-shock DNA-binding protein family protein  54.05 
 
 		 188 aa  51.2  0.000004  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.25862 
 
 
-
 
NC_007614  Nmul_A0905  putative sigma 54 modulation protein/ribosomal protein S30EA  77.78 
 
 		 195 aa  49.3  0.00002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.489949  n/a   
 
 
-
 
NC_007404  Tbd_1447  SSU ribosomal protein S30P / sigma 54 modulation protein  44.83 
 
 		 189 aa  48.9  0.00003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.12501  normal  0.434118 
 
 
-
 
NC_009484  Acry_2991  cold-shock DNA-binding domain-containing protein  62.16 
 
 		 186 aa  48.9  0.00003  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_006369  lpl1214  hypothetical protein  33.75 
 
 		 190 aa  46.2  0.0001  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_0247  Cold-shock protein DNA-binding  35.9 
 
 		 192 aa  45.1  0.0003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_006368  lpp1208  hypothetical protein  32.5 
 
 		 190 aa  44.3  0.0005  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007484  Noc_2438  sigma 54 modulation protein/ribosomal protein S30EA  33.77 
 
 		 182 aa  43.1  0.001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_49880  Cold-shock domain-containing protein  62.07 
 
 		 189 aa  43.1  0.001  Azotobacter vinelandii DJ  Bacteria  normal  0.335771  n/a   
 
 
-
 
NC_007908  Rfer_3849  putative sigma 54 modulation protein/ribosomal protein S30EA  72 
 
 		 196 aa  40.4  0.008  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
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