| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0247 |
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| Symbol | |
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| ID | 7316825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 270165 |
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| End bp | 270743 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643615132 |
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| Product | Cold-shock protein DNA-binding |
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| Protein accession | YP_002512333 |
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| Protein GI | 220933434 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAG AACGCGTCCC CCTGGTGGAA GTGACCTTTC GCAACATGGA TCCGTCGCCT
GCCGTGGAGG ACAAGGTGCG TGCCCAGATC GAAAAGCTCG GGCAGTTCCA TGACCACATC
ATGGCCTGCC GGGTGGTGGT GGAGGCGGGC CACCGGCATC ACCACAAAGG CAATCTCTAT
CACGTGCGCA TCGACCTCAC CGTGCCCAAC GGCGAGCTGG TGGCCAGCCG GGAACCCTCC
GGGCACCATG CCCACGAGGA TGTCTATGTC GCCGTCCGCG ATGCCTTCGA TGCCATGCGC
CGGCAGCTCC AGGACCGGCT GCGCAAGCAG CGGGGCAGGG TGAAGCATCA CGAGACGCCG
CCCCACGGCG TGGTCCGGGA GATCGCCCCC ATGTCCGATT ACGGTCTGAT CGAGACCCCG
GACGGCCGGG AGATCCGCTT CACCAGCAAG AGCGTGGTGG ACTACGACTT CGCCAGGCTG
GAGGTGGGCG ACCGGGTCTG GTTCACGGAG GTGGACAGCG ATGACGGGCC GGCGGCCAGC
ACGGTGCATG TGGAAGGCAA GCATCACATC GTGGGTTGA
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| Protein sequence | MNAERVPLVE VTFRNMDPSP AVEDKVRAQI EKLGQFHDHI MACRVVVEAG HRHHHKGNLY
HVRIDLTVPN GELVASREPS GHHAHEDVYV AVRDAFDAMR RQLQDRLRKQ RGRVKHHETP
PHGVVREIAP MSDYGLIETP DGREIRFTSK SVVDYDFARL EVGDRVWFTE VDSDDGPAAS
TVHVEGKHHI VG
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