| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_49880 |
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| Symbol | |
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| ID | 7763840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 5054097 |
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| End bp | 5054666 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643807820 |
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| Product | Cold-shock domain-containing protein |
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| Protein accession | YP_002802054 |
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| Protein GI | 226946981 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.335771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAAGC CAGTGCAGAT CCATTTCCAC CAGATCGAGC CCTCTCCGGC CATCGAGGCG
CACATCCGCG AGCAGTGCGA CGAACTCGAA GAATTCTACG AGCGGATCAT CGGCTGTTCG
GTCACCTTCG ACGCCCCGCA CCGGCGCCAC CACCAGGGCC GGCTCTATCA GGTCAAGGTG
CACCTGACGC TGCCGGACGG CGACATCCAT TCCAGCCAGG CTCACCACGA CGAGCACGCC
CACGAAGACC CGTACGTGGC CATCCGCGAC AGCTTCAGGG CCGTGCGCCG CCAGTTGGAG
GACTACGCGC GCAAGCGCCG GGCCGAGGTC AAGAGCCACG AACCGGCGCA GCAGGAGGGG
CGGGTGTCGG AACTGCACGG CGAGAGGGAC TTCGGCATGC TCGAAACCGC GGACGGGCGG
CAGATCTACT TCCATCGCCA CAGCGTGCTG AACGCGGCCT TCGACCACCT GCATGTCGGC
GACCAGGTGC GCTTTTCCGA AGAGGCCGGA GAGCAGGGAC CGCAGGCCAG CACCGTGCAT
CCGTCGGGCA GGTCGCACGC GCAGGGCTGA
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| Protein sequence | MQKPVQIHFH QIEPSPAIEA HIREQCDELE EFYERIIGCS VTFDAPHRRH HQGRLYQVKV
HLTLPDGDIH SSQAHHDEHA HEDPYVAIRD SFRAVRRQLE DYARKRRAEV KSHEPAQQEG
RVSELHGERD FGMLETADGR QIYFHRHSVL NAAFDHLHVG DQVRFSEEAG EQGPQASTVH
PSGRSHAQG
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