| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1447 |
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| Symbol | |
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| ID | 3673560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1533080 |
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| End bp | 1533649 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637710132 |
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| Product | SSU ribosomal protein S30P / sigma 54 modulation protein |
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| Protein accession | YP_315205 |
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| Protein GI | 74317465 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.12501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.434118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACAC CGCTGCAGAT CACATTCCGC GACATCGAGC CCTCCGAAGC GCTCGAGGCG
CACATCCGCG AGAAGGCCGA CAAGCTCGAG ACGTTTTTCC AGCCGATCAT GTCCTGCCGC
GTGGTGCTCG AAGTGCCGCA CCAGCACAAG CATCAGGGCA AGGTATTCAA GTTGCGGATC
GATATCGGCG TGCCGGGAAG CGAGATCGTC GTCAACCGCG ATGCGCACGA AGACGTCTAT
GTCGCGCTGC GTGACGCGTT CGACGCCGCG CGGCGCCAGC TCGACGACTA TTCGCGGCGG
TTGCGCCGTG AGACCAAGAC CCACGACCGG GAGTTCATCG GCGAGGTCGT CCGTCTCTAT
CCCGACGAGG GCTACGGTTT TGTGCGCCGC CCGGACGGCG AGGAGCGGTA TTTCAGTGCC
GCCAACCTCG TGAATGTCAG GCTCGAGCAG CTCGGCGAGG GCGACGCGGT CAAGTTCATC
GAGGACATGT CGGCAGCCGA AGGCCCGCAG GCCAAGCGCG TGAGCGTCGG TCACCACCAG
CTGCCGCCCG GCGGGCCCGA GGCGGAGTGA
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| Protein sequence | MKTPLQITFR DIEPSEALEA HIREKADKLE TFFQPIMSCR VVLEVPHQHK HQGKVFKLRI
DIGVPGSEIV VNRDAHEDVY VALRDAFDAA RRQLDDYSRR LRRETKTHDR EFIGEVVRLY
PDEGYGFVRR PDGEERYFSA ANLVNVRLEQ LGEGDAVKFI EDMSAAEGPQ AKRVSVGHHQ
LPPGGPEAE
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