More than 300 homologs were found in PanDaTox collection
for query gene TRQ2_1579 on replicon NC_010483
Organism: Thermotoga sp. RQ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009486  Tpet_1530  GTP-dependent nucleic acid-binding protein EngD  99.72 
 
 
357 aa  708    Thermotoga petrophila RKU-1  Bacteria  normal  0.0330741  n/a   
 
 
-
 
NC_010483  TRQ2_1579  GTP-dependent nucleic acid-binding protein EngD  100 
 
 
360 aa  715    Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0027  GTP-binding protein YchF  48.9 
 
 
366 aa  339  4e-92  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1634  GTP-dependent nucleic acid-binding protein EngD  48.61 
 
 
362 aa  322  7e-87  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0594912  n/a   
 
 
-
 
NC_002950  PG0048  GTP-dependent nucleic acid-binding protein EngD  44.75 
 
 
367 aa  311  1e-83  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_010320  Teth514_2022  GTP-dependent nucleic acid-binding protein EngD  46.83 
 
 
363 aa  311  1e-83  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1835  GTP-dependent nucleic acid-binding protein EngD  44.63 
 
 
365 aa  311  1e-83  Clostridium perfringens SM101  Bacteria  normal  0.259258  n/a   
 
 
-
 
NC_010571  Oter_3096  GTP-binding protein YchF  46.05 
 
 
367 aa  310  2.9999999999999997e-83  Opitutus terrae PB90-1  Bacteria  normal  normal  0.156001 
 
 
-
 
NC_008261  CPF_2121  GTP-dependent nucleic acid-binding protein EngD  44.35 
 
 
365 aa  310  2.9999999999999997e-83  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0954  GTP-dependent nucleic acid-binding protein EngD  45.71 
 
 
365 aa  309  4e-83  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_09848  putative ATP/GTP-binding protein  45.6 
 
 
364 aa  309  4e-83  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_010830  Aasi_0386  GTP-dependent nucleic acid-binding protein EngD  46.41 
 
 
365 aa  308  6.999999999999999e-83  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_010730  SYO3AOP1_1615  GTP-dependent nucleic acid-binding protein EngD  46.17 
 
 
370 aa  308  1.0000000000000001e-82  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0334  GTP-dependent nucleic acid-binding protein EngD  45.73 
 
 
365 aa  306  2.0000000000000002e-82  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.246253 
 
 
-
 
NC_010718  Nther_1835  GTP-binding protein YchF  45.71 
 
 
363 aa  306  2.0000000000000002e-82  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  decreased coverage  0.00000078734  normal  0.600832 
 
 
-
 
NC_002978  WD0442  GTP-dependent nucleic acid-binding protein EngD  44.63 
 
 
364 aa  306  5.0000000000000004e-82  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.392269  n/a   
 
 
-
 
NC_009012  Cthe_0877  GTP-dependent nucleic acid-binding protein EngD  44.93 
 
 
364 aa  306  5.0000000000000004e-82  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00007173  n/a   
 
 
-
 
NC_009441  Fjoh_2467  GTP-dependent nucleic acid-binding protein EngD  46.26 
 
 
364 aa  305  1.0000000000000001e-81  Flavobacterium johnsoniae UW101  Bacteria  normal  0.293996  n/a   
 
 
-
 
NC_013205  Aaci_2931  GTP-binding protein YchF  44.75 
 
 
366 aa  303  2.0000000000000002e-81  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013162  Coch_0099  GTP-dependent nucleic acid-binding protein EngD  44.88 
 
 
363 aa  303  4.0000000000000003e-81  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.76867  n/a   
 
 
-
 
NC_013411  GYMC61_3547  GTP-dependent nucleic acid-binding protein EngD  44.6 
 
 
366 aa  300  2e-80  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007614  Nmul_A0592  GTP-dependent nucleic acid-binding protein EngD  45.58 
 
 
367 aa  300  2e-80  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.269932  n/a   
 
 
-
 
NC_008740  Maqu_2368  GTP-dependent nucleic acid-binding protein EngD  44.97 
 
 
363 aa  300  3e-80  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4937  GTP-dependent nucleic acid-binding protein EngD  45.71 
 
 
366 aa  299  6e-80  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000108566  n/a   
 
 
-
 
NC_013037  Dfer_4776  GTP-dependent nucleic acid-binding protein EngD  44.75 
 
 
366 aa  298  7e-80  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.117268  hitchhiker  0.000704522 
 
 
-
 
NC_010718  Nther_2917  GTP-binding protein YchF  45.45 
 
 
368 aa  298  8e-80  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.000213354  normal 
 
 
-
 
NC_008148  Rxyl_2193  GTP-dependent nucleic acid-binding protein EngD  44.41 
 
 
369 aa  298  1e-79  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.7891  n/a   
 
 
-
 
NC_008044  TM1040_0224  GTP-dependent nucleic acid-binding protein EngD  44.6 
 
 
365 aa  297  2e-79  Ruegeria sp. TM1040  Bacteria  normal  0.626495  normal 
 
 
-
 
NC_011126  HY04AAS1_0515  GTP-dependent nucleic acid-binding protein EngD  46.01 
 
 
368 aa  297  2e-79  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_1320  GTP-binding protein YchF  45.45 
 
 
364 aa  297  2e-79  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3794  GTP-binding protein YchF  43.8 
 
 
363 aa  296  5e-79  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0590  GTP-dependent nucleic acid-binding protein EngD  43.92 
 
 
365 aa  295  6e-79  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000196131  n/a   
 
 
-
 
NC_007947  Mfla_0675  GTP-dependent nucleic acid-binding protein EngD  44.57 
 
 
361 aa  295  6e-79  Methylobacillus flagellatus KT  Bacteria  normal  0.762559  normal 
 
 
-
 
NC_010001  Cphy_2482  GTP-binding protein YchF  44.23 
 
 
365 aa  295  7e-79  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5626  GTP-dependent nucleic acid-binding protein EngD  45.18 
 
 
366 aa  295  9e-79  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000871672  n/a   
 
 
-
 
NC_012793  GWCH70_3418  GTP-dependent nucleic acid-binding protein EngD  44.63 
 
 
366 aa  295  9e-79  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000016062  n/a   
 
 
-
 
NC_006368  lpp2707  GTP-dependent nucleic acid-binding protein EngD  43.89 
 
 
363 aa  294  1e-78  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_23370  GTP-binding protein YchF  45.86 
 
 
364 aa  294  1e-78  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000000155952  n/a   
 
 
-
 
NC_011773  BCAH820_5585  GTP-dependent nucleic acid-binding protein EngD  44.9 
 
 
366 aa  294  2e-78  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000269 
 
 
-
 
NC_011004  Rpal_4838  GTP-dependent nucleic acid-binding protein EngD  44.88 
 
 
365 aa  294  2e-78  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5328  GTP-dependent nucleic acid-binding protein EngD  44.9 
 
 
366 aa  294  2e-78  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00440809  n/a   
 
 
-
 
NC_005957  BT9727_5156  GTP-dependent nucleic acid-binding protein EngD  44.9 
 
 
366 aa  294  2e-78  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.474948  n/a   
 
 
-
 
NC_006274  BCZK5172  GTP-dependent nucleic acid-binding protein EngD  44.9 
 
 
366 aa  294  2e-78  Bacillus cereus E33L  Bacteria  decreased coverage  0.000341574  n/a   
 
 
-
 
NC_010002  Daci_1534  GTP-binding protein YchF  43.21 
 
 
364 aa  294  2e-78  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.452605 
 
 
-
 
NC_007498  Pcar_2000  GTP-dependent nucleic acid-binding protein EngD  44.17 
 
 
364 aa  294  2e-78  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0365484  n/a   
 
 
-
 
NC_007530  GBAA_5724  GTP-dependent nucleic acid-binding protein EngD  44.9 
 
 
366 aa  294  2e-78  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000153579  n/a   
 
 
-
 
NC_011658  BCAH187_A5663  GTP-dependent nucleic acid-binding protein EngD  44.9 
 
 
366 aa  294  2e-78  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000189692  n/a   
 
 
-
 
NC_013223  Dret_1390  GTP-binding protein YchF  43.77 
 
 
367 aa  293  3e-78  Desulfohalobium retbaense DSM 5692  Bacteria  decreased coverage  0.00313988  normal  0.853679 
 
 
-
 
NC_007413  Ava_4625  GTP-dependent nucleic acid-binding protein EngD  44.35 
 
 
363 aa  293  3e-78  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0369347 
 
 
-
 
NC_009674  Bcer98_4015  GTP-dependent nucleic acid-binding protein EngD  44.63 
 
 
366 aa  293  3e-78  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.362655  n/a   
 
 
-
 
NC_011992  Dtpsy_2928  GTP-binding protein YchF  42.94 
 
 
364 aa  293  3e-78  Acidovorax ebreus TPSY  Bacteria  normal  0.79075  n/a   
 
 
-
 
NC_008782  Ajs_3618  GTP-binding protein YchF  42.94 
 
 
364 aa  293  3e-78  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0664  GTP-dependent nucleic acid-binding protein EngD  44.75 
 
 
364 aa  293  4e-78  Geobacter sulfurreducens PCA  Bacteria  normal  0.151468  n/a   
 
 
-
 
NC_011725  BCB4264_A5602  GTP-dependent nucleic acid-binding protein EngD  44.63 
 
 
366 aa  293  4e-78  Bacillus cereus B4264  Bacteria  normal  0.0104876  n/a   
 
 
-
 
NC_006369  lpl2579  GTP-dependent nucleic acid-binding protein EngD  43.61 
 
 
363 aa  292  5e-78  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B5333  GTP-dependent nucleic acid-binding protein EngD  44.63 
 
 
366 aa  292  5e-78  Bacillus cereus G9842  Bacteria  hitchhiker  0.000128538  hitchhiker  0.000000465437 
 
 
-
 
NC_008048  Sala_1621  GTP-dependent nucleic acid-binding protein EngD  45 
 
 
365 aa  292  5e-78  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.340405 
 
 
-
 
NC_010814  Glov_2592  GTP-dependent nucleic acid-binding protein EngD  44.85 
 
 
364 aa  292  6e-78  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000145967  n/a   
 
 
-
 
NC_003912  CJE1008  GTP-dependent nucleic acid-binding protein EngD  45.03 
 
 
367 aa  292  7e-78  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0937  GTP-dependent nucleic acid-binding protein EngD  45.3 
 
 
367 aa  292  7e-78  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.844815  n/a   
 
 
-
 
NC_007604  Synpcc7942_0554  GTP-dependent nucleic acid-binding protein EngD  44.9 
 
 
363 aa  292  7e-78  Synechococcus elongatus PCC 7942  Bacteria  normal  0.268556  normal 
 
 
-
 
NC_013161  Cyan8802_3030  GTP-dependent nucleic acid-binding protein EngD  44.35 
 
 
363 aa  291  8e-78  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_3090  GTP-dependent nucleic acid-binding protein EngD  44.35 
 
 
363 aa  291  8e-78  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_002977  MCA2032  GTP-dependent nucleic acid-binding protein EngD  43.85 
 
 
363 aa  291  1e-77  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0832  GTP-dependent nucleic acid-binding protein EngD  43.25 
 
 
365 aa  291  1e-77  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.596144  n/a   
 
 
-
 
NC_009253  Dred_1280  GTP-binding protein YchF  43.53 
 
 
367 aa  290  2e-77  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_0445  GTP-binding protein YchF  43.13 
 
 
373 aa  291  2e-77  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.0330999  normal 
 
 
-
 
NC_009636  Smed_2266  GTP-dependent nucleic acid-binding protein EngD  42.27 
 
 
367 aa  290  2e-77  Sinorhizobium medicae WSM419  Bacteria  normal  0.83049  normal  0.983976 
 
 
-
 
NC_008752  Aave_0887  GTP-binding protein YchF  42.78 
 
 
364 aa  290  2e-77  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0231852  normal  0.589868 
 
 
-
 
NC_009049  Rsph17029_2490  GTP-dependent nucleic acid-binding protein EngD  42.98 
 
 
365 aa  290  3e-77  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.071382  normal 
 
 
-
 
NC_012560  Avin_41550  GTP-dependent nucleic acid-binding protein EngD  44.17 
 
 
366 aa  290  4e-77  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0763  GTP-dependent nucleic acid-binding protein EngD  43.92 
 
 
366 aa  289  4e-77  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3999  GTP-dependent nucleic acid-binding protein EngD  44.6 
 
 
365 aa  289  4e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1389  GTP-dependent nucleic acid-binding protein EngD  43.77 
 
 
366 aa  290  4e-77  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.159782 
 
 
-
 
NC_007354  Ecaj_0101  GTP-dependent nucleic acid-binding protein EngD  44.44 
 
 
362 aa  289  5.0000000000000004e-77  Ehrlichia canis str. Jake  Bacteria  normal  0.720243  n/a   
 
 
-
 
NC_011146  Gbem_2765  GTP-dependent nucleic acid-binding protein EngD  44.72 
 
 
364 aa  289  5.0000000000000004e-77  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2121  GTP-dependent nucleic acid-binding protein EngD  44.88 
 
 
366 aa  289  5.0000000000000004e-77  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.328757  n/a   
 
 
-
 
NC_009719  Plav_2255  GTP-binding protein YchF  42.86 
 
 
369 aa  289  5.0000000000000004e-77  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.416023  normal  0.725839 
 
 
-
 
NC_012039  Cla_0677  GTP-dependent nucleic acid-binding protein EngD  44.04 
 
 
366 aa  289  6e-77  Campylobacter lari RM2100  Bacteria  normal  0.538211  n/a   
 
 
-
 
NC_007799  ECH_0154  GTP-dependent nucleic acid-binding protein EngD  44.17 
 
 
362 aa  288  8e-77  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1574  GTP-dependent nucleic acid-binding protein EngD  44.2 
 
 
365 aa  288  8e-77  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.796627 
 
 
-
 
NC_008609  Ppro_0746  GTP-dependent nucleic acid-binding protein EngD  44.01 
 
 
364 aa  288  8e-77  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0310591  n/a   
 
 
-
 
NC_013510  Tcur_1095  GTP-binding protein YchF  47.25 
 
 
363 aa  288  9e-77  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0537245  n/a   
 
 
-
 
NC_008825  Mpe_A3166  putative GTP-binding protein  42.5 
 
 
364 aa  288  9e-77  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00563466 
 
 
-
 
NC_002947  PP_0719  GTP-dependent nucleic acid-binding protein EngD  43.65 
 
 
366 aa  288  1e-76  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009632  SaurJH1_0422  GTP-dependent nucleic acid-binding protein EngD  43.33 
 
 
365 aa  288  1e-76  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0242427  n/a   
 
 
-
 
NC_009487  SaurJH9_0411  GTP-dependent nucleic acid-binding protein EngD  43.33 
 
 
365 aa  288  1e-76  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00200515  n/a   
 
 
-
 
NC_008463  PA14_61820  GTP-dependent nucleic acid-binding protein EngD  44.2 
 
 
366 aa  288  1e-76  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000490412  hitchhiker  0.00796401 
 
 
-
 
NC_013730  Slin_4281  GTP-binding protein YchF  42.98 
 
 
366 aa  287  2e-76  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2845  GTP-dependent nucleic acid-binding protein EngD  43.73 
 
 
364 aa  287  2e-76  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000149199  hitchhiker  0.000000000000211408 
 
 
-
 
NC_008786  Veis_0466  GTP-binding protein YchF  42.78 
 
 
364 aa  287  2e-76  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4159  GTP-dependent nucleic acid-binding protein EngD  43.77 
 
 
365 aa  287  2e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.471291  normal  0.369246 
 
 
-
 
NC_007802  Jann_3582  GTP-dependent nucleic acid-binding protein EngD  43.89 
 
 
365 aa  287  2e-76  Jannaschia sp. CCS1  Bacteria  normal  0.216393  normal 
 
 
-
 
NC_009428  Rsph17025_0348  GTP-dependent nucleic acid-binding protein EngD  43.53 
 
 
365 aa  287  2e-76  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.079313  normal 
 
 
-
 
NC_008789  Hhal_0986  GTP-binding protein YchF  42.94 
 
 
363 aa  287  2e-76  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_0884  GTP-dependent nucleic acid-binding protein EngD  44.2 
 
 
367 aa  287  2e-76  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5323  GTP-dependent nucleic acid-binding protein EngD  44.17 
 
 
366 aa  287  2e-76  Pseudomonas aeruginosa PA7  Bacteria  normal  0.207284  n/a   
 
 
-
 
NC_010505  Mrad2831_4124  GTP-dependent nucleic acid-binding protein EngD  44.04 
 
 
365 aa  287  2e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0231  GTP-dependent nucleic acid-binding protein EngD  44.08 
 
 
363 aa  286  2.9999999999999996e-76  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.375519 
 
 
-
 
NC_010501  PputW619_4464  GTP-dependent nucleic acid-binding protein EngD  43.65 
 
 
366 aa  286  2.9999999999999996e-76  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
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