Gene Rxyl_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2193 
Symbol 
ID4117427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2209355 
End bp2210464 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content74% 
IMG OID638036985 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_644949 
Protein GI108805012 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.7891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACCGT CTGATACGAT ACCTCCCATG AAGGTCGGCA TCGTGGGGCT GCCCAACGTC 
GGCAAGTCCA CCCTGTTCAA CGCCCTGACC CGCGCGGGGG CCGAGGCCCA GAACTACCCG
TTCACCACCG TCGACCCGAA CGTCGGGGTG GCGGCGGTGC CGGACGGGCG CCTGCAGAGG
CTGGCGGAGG CGGTGGGGGG CGTCCGCGCC GTCCCGGCGA CGGTGGAGTT CGTGGACATC
GCGGGGCTGG TGCGGGGCGC CAGCCGGGGC GAGGGGCTCG GCAACCGCTT TCTGGCGCAC
ATCCGGGAGT GCGACGCGGT GGCCCACGTG GTCCGCTGCT TCGAGGACGA GAACGTCGCC
CACGTGCACG GGGGGATAGA CCCGGTGGGG GACGCGGAGA CGGTGAACGC CGAGCTTCTG
CTCGCGGACC TGGCGACCGT GGAGCGGCGT CTGGAGCAGG CCTCCCGGGC CGCCAAGAGC
GGGGACCCGA AGCGCCGGGC GGAGGCGGCG GCGCTGGAGC GGCTGCGGGA CCACCTCGCG
AAGGGAGGGC AGGCCCGCAC CTTCCCGGAG CCCGGGGAGG TCTCGGAGGT GCTCCGCACG
CTGCTTACGG CCAAGCCGAC GCTGTACGTG GCCAACGTGG ACGAGGGGTC GCTGGCCGCG
GGCAACGCCT ACAGCGCGGC GGTGGAGGAG CTCGCCGGGC GGGAGGGGGC GGGGGCGGTG
CGGCTGTGCG CCCGGCTCGC CGCCGAGCTC GCCGAGCTGC CCGCAGAGGA GGCCCGCGAG
TACCTGGGGG TGCTCGGGGT CGAGGAGTCC GGCTTCGAGG AGTTCGTGCG GGCGGCGTAC
CGGCTGCTCG GCCTGATCAC GTTCTTCACC TTCAACGAGA GGGAGTGCCG GGCCTGGACG
GTGCGCGAGG GCGCCACCGC GCGCGAGGCG GCCGGCCGGA TACACACCGA CATGGAGCGC
GGCTTCGTGG CCGCGGAGGT CGGGCGCTGG GAGGACATCG TGGCGGCGGG CTCGTGGGCC
AGGGCCCGCG AGGAGGCGAA GGTCCGGCGG GAGGGCCGGG ACTACGTGAT GCGCGACGGC
GACGTGCTGC TGGTCCGCTT CAACGCGTGA
 
Protein sequence
MLPSDTIPPM KVGIVGLPNV GKSTLFNALT RAGAEAQNYP FTTVDPNVGV AAVPDGRLQR 
LAEAVGGVRA VPATVEFVDI AGLVRGASRG EGLGNRFLAH IRECDAVAHV VRCFEDENVA
HVHGGIDPVG DAETVNAELL LADLATVERR LEQASRAAKS GDPKRRAEAA ALERLRDHLA
KGGQARTFPE PGEVSEVLRT LLTAKPTLYV ANVDEGSLAA GNAYSAAVEE LAGREGAGAV
RLCARLAAEL AELPAEEARE YLGVLGVEES GFEEFVRAAY RLLGLITFFT FNERECRAWT
VREGATAREA AGRIHTDMER GFVAAEVGRW EDIVAAGSWA RAREEAKVRR EGRDYVMRDG
DVLLVRFNA