Gene Nther_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2917 
Symbol 
ID6316063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3149797 
End bp3150903 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content35% 
IMG OID642645290 
ProductGTP-binding protein YchF 
Protein accessionYP_001919051 
Protein GI188587506 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000213354 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTT TAAAATGCGG GATAATTGGT TTACCAAATG TGGGAAAATC AACTTTATTT 
AACGCATTAA CAAATGCCGG GGCTGCTGTT GCCAATTATG CTTTCTGTAC AGTGGATCCC
AACAAAGGAA TAGTAGCAAT TCCTGACGAA CGATTAGAAC AAGTTAAGTA TTGTGCAGGT
TCCCCCGAAA AGACTGAAGG TTCCATAGAA TTTGTCGATA TAGCTGGCTT GGTCAAAGGG
GCCAATCAAG GAGAAGGTTT GGGAAATCAA TTTTTATCCC ATATTCGTGA AATGGATGCA
TTAATTCACG TATTAAGGGG CTTTGAAGAC GAAAATGTAG GACATATCTA TGGACAACCT
GATATTCATG AAGATTTAGA AGTTATTAAT TTAGAGCTTA TTTTGAAGGA CTTAGAAACA
ATTGATCGCA GACTTGAAAA AACTGAAAAA ATGTTAAAAA CTAACAAAAA AATATATCAT
GAAGAATTTG AAGTACTCAA TTATATTAAA AAACAATTAG AACAAGGTCA TAATATTAAA
GATCTTAAAT TGGCTGACAA AGAGAGGAAG TTCATTGACT ATCTTAATTT GCTAACTCAA
AAACCCGTAT TACATGTGAT AAACGTTAGT GAAACAGCTT TTTCTAATTT TGAAAAAAGA
CAAGCTCTTG AAAAGTATCA GCAAAAGATA GAGCAAACAC AAGGAGGAGA ATGTTTGGCA
ATATCGGCTA AGTTGGAGTC AGAATTGTTA GAGTTGGATC CTACTGAAAA AGATGAATTT
TTAGAGGAGT TCAATTTAAC TGATTCAGGA TTAAACCGAC TAATAAAAAA AGCATATCAG
TTACTTGACT TAATAACTTT TTTCACAGCT AACGAAAATG AAGCCCGGGC CTGGGCTATT
AAACGAGGTA CCAGAGCAGT CAAAGGGGCT GGCCAAATAC ATTCAGATAT GGAAAAAGGT
TTTATAAAGG CTGAAGTTAT CAATTGGGAG GAACTGGTAA ATTGCGGAAA CTTCCCCCGT
GCTAAAGAAG AAGGGAAATT GCGTTTAGAA GGTAAGGACT ACATAATACA AGAGGGCGAT
GTGATAACTT TTAGATTCAA TGTTTAA
 
Protein sequence
MSILKCGIIG LPNVGKSTLF NALTNAGAAV ANYAFCTVDP NKGIVAIPDE RLEQVKYCAG 
SPEKTEGSIE FVDIAGLVKG ANQGEGLGNQ FLSHIREMDA LIHVLRGFED ENVGHIYGQP
DIHEDLEVIN LELILKDLET IDRRLEKTEK MLKTNKKIYH EEFEVLNYIK KQLEQGHNIK
DLKLADKERK FIDYLNLLTQ KPVLHVINVS ETAFSNFEKR QALEKYQQKI EQTQGGECLA
ISAKLESELL ELDPTEKDEF LEEFNLTDSG LNRLIKKAYQ LLDLITFFTA NENEARAWAI
KRGTRAVKGA GQIHSDMEKG FIKAEVINWE ELVNCGNFPR AKEEGKLRLE GKDYIIQEGD
VITFRFNV