Gene Dhaf_4937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4937 
Symbol 
ID7261969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp5260013 
End bp5261113 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content49% 
IMG OID643564850 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_002461367 
Protein GI219670932 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000000108566 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTGC ATGCAGGGAT TGTTGGTTTG CCTAATGTAG GAAAATCAAC ATTATTTAAT 
GCCATAACTC AAGCGGGTGC AGAAGCCGCA AATTACCCCT TTTGCACAAT TGACCCCAAT 
GTAGGAATGG TACAGGTACC GGATGCCCGC CTGCAGGTTC TCGCGGAGAT GGTTCATCCT 
GATAAAATAG TCCCTGCTAC GGTGGAATTT GTGGATATTG CCGGATTGGT CAAGGGAGCC 
AGCAAGGGAG AGGGATTGGG AAATAAATTC TTATCCCATA TCCGGGAAGT GGATGCCGTT 
GTTCATGTGG TTCGCTGCTT TGAAGACAGC AATGTGGTCC ATGTGGAAGG CAGTGTGGAT 
CCGAAGCGGG ACATCGACAT CATCCAGCTG GAGCTTATCC TCGCCGATAT GGAAAGCGTA 
GAAAAGCGTT TGGAGCGTTC GGCTAAGCTC TTGAAATCAG GGGATAAAAA GGCCCAGGTT 
GAAGTGGCTC TGCTCAACCG TCTAAAAGAG ACCCTGGATG CCGGTCTGGC AGCCCGTTCC 
TTGGAATTCA GCGATGAGGA GCGGGAAATC CTGAAATCCT TCCCTCTCTT AAGCATGAAG 
CCGGTTCTCT ACGCCGCCAA TGTGAGTGAA GAGGAAATAG CCCAGCCTGA CAATAACCCT 
TATGTCCGCA AAGTAAGGGA AATAGCCGCC GCGGAAAATT CAGAGGTAGT GGTGGTCTGC 
GCCAAGATCG AGGCTGAGAT TGCCGAGCTG GAAGAAGAGG AGAAAAAGGT TTTCCTGGAA 
GACTTAGGTC TTACAGAATC CGGTTTGGAC CGCCTGATTC GTGCCGCTTT CCATTTGCTT 
GGCCTGATGA CTTATTTTAC AGCAGGTCAA ATCGAAGTAA GAGCTTGGGA GATTCGCCGG 
GGAATGAAAG CGCCGCAAGC GGCTGGAGTA ATTCACACTG ACTTTGAGCG GGGATTTATC 
CGCGCGGAAG TGGTTGCCTA TAAGGACTTC GTGGAAAATG GCGGTCTTAA TGGGGCCAAA 
GAAAAGGGTC TGGTTCGTTT AGAAGGAAAA GAATATGTCA TGAATGACGG CGATATCGTT 
CATTTTCGCT TTAATGTTTA A
 
Protein sequence
MTLHAGIVGL PNVGKSTLFN AITQAGAEAA NYPFCTIDPN VGMVQVPDAR LQVLAEMVHP 
DKIVPATVEF VDIAGLVKGA SKGEGLGNKF LSHIREVDAV VHVVRCFEDS NVVHVEGSVD 
PKRDIDIIQL ELILADMESV EKRLERSAKL LKSGDKKAQV EVALLNRLKE TLDAGLAARS 
LEFSDEEREI LKSFPLLSMK PVLYAANVSE EEIAQPDNNP YVRKVREIAA AENSEVVVVC 
AKIEAEIAEL EEEEKKVFLE DLGLTESGLD RLIRAAFHLL GLMTYFTAGQ IEVRAWEIRR 
GMKAPQAAGV IHTDFERGFI RAEVVAYKDF VENGGLNGAK EKGLVRLEGK EYVMNDGDIV 
HFRFNV