Gene ECH_0154 details

Gene Information

• Locus tag: ECH_0154
• Symbol: ychF
• ID: 3928021
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia chaffeensis str. Arkansas
• Kingdom: Bacteria
• Replicon accession: NC_007799
• Strand: -
• Start bp: 145220
• End bp: 146308
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637901278
• Product: GTP-dependent nucleic acid-binding protein EngD
• Protein accession: YP_506981
• Protein GI: 88658475
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0012] Predicted GTPase, probable translation factor
• TIGRFAM ID: [TIGR00092] GTP-binding protein YchF

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGATTGA ACTGCGGTAT TGTTGGACTA CCTAATGTAG GAAAATCAAC TCTATTTAAT 
GCATTAACAC AAACTATGGT AGCAGAAGTA GCAAACTACC CATTCTGTAC AATAGAACCA 
AATATAGGCA AAGCAATAGT ACAAGATCAT AGGTTAAAAA CTTTAGCAAA CATAGCATCT 
TCTAAGAAAA TTATATACAA CCAAGTTGAA TGTGTCGATA TTGCTGGATT GGTCAGTGGA 
GCAAGTCAAG GTGAAGGATT AGGAAATAAA TTCTTAAGTC ATATAAGAGA AGTGGATGCT 
ATTATTCATG TATTACGATG TTTCGGAGAT CAAAACATTA GCCATGTTAA CCAAACTGTA 
GACCCAATAA GTGATGCAGA AATTGTAGAA ATGGAGCTGA TTTTAGCTGA TATTGAAAGT 
TTAAAACGTC GCTTACCTGC AACAGAAAAA GCTGTAAAAG CTAATAAAGA ACCCAGAAAG 
AAATTAGATA CTATATTAGA AGTATTAAGT GTGCTAGAAG CTGGCAATTT AGCAAAAAGT 
GCAAAACACC TAGGCGATGA TTTAAAACAA CTACAACTCA TTACAACAAA ACCTATGATG 
TACGTATGTA ATGTAGAAGA ATCGAATGTA ACCACTGGAA ATGCTTTATC AGAAAAAGTA 
AAACTTATGG CAGAAAAAAA ACATAATAAG TTTTGTTGTA TTTCAGCAAA ATTAGAAGCA 
GATGTATCAA GTTTAGAAAC AGAAGAAGAA AAACAAATTT TTCTAGCTGA GTTTAATTTA 
CAAGAATCTG GTACAACATC TGTAGTAAAA ACAATGTATG ATCTGCTAGA TATGATTACA 
TTTTTTACAT TAGGTCCACA AGAAGCACGT GCCTGGCCAA TAAAAAGATT CTCTACTGCT 
AGCAGTGCTG CAGGCGTAAT ACACACTGAC TTTGAAAAAG GGTTCATAAA AGCAGAGCTC 
ATTAGTTTTG ATGACTATAT AAAATACAAT GGAGAGGCAA AGTGCAAAGA AGCTGGAAAA 
GTCAGGTTTG AAGGCAGAGA TTATATCGTA CAAGATGGAG ATATAATACA CTTTAGGCAT 
AATAAATAA 

 

Protein sequence

MGLNCGIVGL PNVGKSTLFN ALTQTMVAEV ANYPFCTIEP NIGKAIVQDH RLKTLANIAS 
SKKIIYNQVE CVDIAGLVSG ASQGEGLGNK FLSHIREVDA IIHVLRCFGD QNISHVNQTV 
DPISDAEIVE MELILADIES LKRRLPATEK AVKANKEPRK KLDTILEVLS VLEAGNLAKS 
AKHLGDDLKQ LQLITTKPMM YVCNVEESNV TTGNALSEKV KLMAEKKHNK FCCISAKLEA 
DVSSLETEEE KQIFLAEFNL QESGTTSVVK TMYDLLDMIT FFTLGPQEAR AWPIKRFSTA 
SSAAGVIHTD FEKGFIKAEL ISFDDYIKYN GEAKCKEAGK VRFEGRDYIV QDGDIIHFRH 
NK