Gene GSU0664 details

Gene Information

• Locus tag: GSU0664
• Symbol: ychF
• ID: 2685532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 700226
• End bp: 701320
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637125336
• Product: GTP-dependent nucleic acid-binding protein EngD
• Protein accession: NP_951721
• Protein GI: 39995770
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0012] Predicted GTPase, probable translation factor
• TIGRFAM ID: [TIGR00092] GTP-binding protein YchF

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.151468
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTTTCA ACTGCGGCAT CGTGGGACTC CCCAACGTGG GAAAGTCGAC CATCTTCAAT 
GCTCTTACCT CGGCGGGGGC CGAGTCGGCC AACTATCCCT TCTGCACCAT CGATCCCAAC 
GTCGGCATCG TGCAGGTTCC GGATGTACGT CTTGACCGGC TGGCGGAGAT CGTCAGCCCC 
GAGCGCATCC TGCCGACCAC CATCGAGTTT GTCGATATAG CCGGCCTGGT AAAGGGGGCC 
AGCCAGGGGG AGGGGCTCGG CAACCAGTTT CTCGGCCATA TCCGCTCCGT AGATGCCATT 
GTCCACGTGG TGCGCTGCTT TGAGGACGAG AACGTGGTGC ACGTGAGCGG CAGCGTCGAT 
CCCTTGCGGG ATATCGACAT CATTCAGACC GAGCTGGCAC TTGCCGATCT GGACAGCGTC 
GACAAAAAGC TGCAGCGCGT CGAAAAGCAG GCGAAAAGCG GTGACAAGCG GCTCAAGGAG 
GAAAGCGAAT TCTACGCTCG CCTCAAGGCG GCCCTGGAGC AGGGAATCCC TGCGCGCCAC 
GTCCAGGTGG CCGACGAAGA GCTCCCCTGG CTGCGGGACC TCCATCTGCT GACCGACAAG 
CCGGTGCTCT ATGTGGCCAA TGTGGCCGAG GACGACCTTG ACGGAGCTCA CCCGGCGGTG 
GCCAAGGTGC GAGAGCTGGC CGAGCGGGAG GGGGCGCGGG TGGTCACCAT CTGCGGTCGG 
ATCGAGGCTG AGATCGCCGA GCTGGATGGG GATGAAAAAC GGGTGTTCCT CGAGGAGATG 
GGGCTTGCCG AGTCGGGACT CGACCGCCTG ATCCGCATGG GCTACGAACT GCTCGGGCTC 
ATCACCTATT TCACTGCCGG CAAAAAAGAA GTCCGGGCCT GGACGATTCC GACCGGCACC 
AAGGCGCCCC AGGCGGCAGG CGTTATCCAC ACCGATTTTG AAAAAGGGTT CATTCGGGCA 
GAAGTCATTG CCTACGCCGA CTACATCGCG GCGGGCGGCG AGACCGGGGC TAAGGAAAAA 
GGGCTCATGC GGCTCGAAGG GAAGGAATAC GTGGTTCAGG ATGGTGATGT CATGCATTTC 
CGGTTCAACG TCTGA 

 

Protein sequence

MGFNCGIVGL PNVGKSTIFN ALTSAGAESA NYPFCTIDPN VGIVQVPDVR LDRLAEIVSP 
ERILPTTIEF VDIAGLVKGA SQGEGLGNQF LGHIRSVDAI VHVVRCFEDE NVVHVSGSVD 
PLRDIDIIQT ELALADLDSV DKKLQRVEKQ AKSGDKRLKE ESEFYARLKA ALEQGIPARH 
VQVADEELPW LRDLHLLTDK PVLYVANVAE DDLDGAHPAV AKVRELAERE GARVVTICGR 
IEAEIAELDG DEKRVFLEEM GLAESGLDRL IRMGYELLGL ITYFTAGKKE VRAWTIPTGT 
KAPQAAGVIH TDFEKGFIRA EVIAYADYIA AGGETGAKEK GLMRLEGKEY VVQDGDVMHF 
RFNV