| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0746 |
|---|
| Symbol | |
|---|
| ID | 4572018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 786267 |
|---|
| End bp | 787361 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639754789 |
|---|
| Product | GTP-dependent nucleic acid-binding protein EngD |
|---|
| Protein accession | YP_900434 |
|---|
| Protein GI | 118579184 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0012] Predicted GTPase, probable translation factor |
|---|
| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0310591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTCA ACTGCGGTAT CGTCGGTCTC CCCAATGTGG GGAAATCCAC CATATTCAAT
GCGCTGACTT CCGCCGGCGC CGAGTCGGCC AACTATCCTT TCTGCACCAT CGACCCCAAT
GTGGGGATCG TGCAGGTGCC GGATCCGCGC ATGGATCAGC TGTCGGCCAT CGTCAATCCG
CAGCGTATCC AGCCCACCAC CATTGAGTTC GTCGATATCG CCGGTCTGGT CAAGGGAGCC
AGCGCCGGGG AGGGGCTGGG CAACCAATTC CTCGGCCATA TCCGCAGCGT TGATGCCATC
ATCCATGTGG TGCGCTGCTT CGATGACGAT AATGTGGTTC ATGTCAACGG ACGTGTGTCG
CCGGCTGCGG ACATCGATAC CATCCATACC GAGTTGGGGC TCTCCGACCT GGAGACGGTG
GAGAAGAAAT TGCAGCGTGC CGAAAAGGCT GGTCGGAGCG GTGATCGCAA GCTGAAAGAT
GAGGCCGCCT TCTACCAGCG GGTCAGGGAT CTGCTTGATC AGGGCAAGAA CGTGCGCGGC
GTGGCGGAAA ACGAGGACGA GCGTCTCTGG TTGCGCGATC TGCACCTCCT GACCGACAAG
CCGGTCTTGT ACGTGGCCAA CGTGGCCGAG GATGATCTTG GCGGTGAACA CCCCTTTGTG
GGGCAGGTGC AGCAGATCGC CAGTCTGGAG GGGGCCGGTG TGGTCACCAT CTGCGGCAAG
CTGGAGGCGG AGATCTCAGA ACTGGAGGGT GAGGAGAAAC AGGCCTTCCT CAATGACATG
GGGCTTGCCG AGGCCGGCCT TGACCGGCTG ATCCGCAGTG GCTACGAACT GCTTGGCCTG
ATCACCTACT TCACCGCCGG GGTCAAGGAG GTGCGCGCCT GGACCATTAC CCGAGGGACC
AAGGCGCCCC AGGCAGCAGG CGTGATCCAC TCCGACTTCG AGAAGGGATT CATTCGCGCC
GAGGTAATCG CTTTCGACGA CTTCATCGCC TGCAATGGCG AGGCGGGTGC CAAGGAGAAG
GGGCTGATGC GGCTGGAGGG GAAGGAGTAC GTTGTCAGGG ATGGCGATGT GATGCACTTC
CGCTTCAACG TCTGA
|
|---|
| Protein sequence | MGFNCGIVGL PNVGKSTIFN ALTSAGAESA NYPFCTIDPN VGIVQVPDPR MDQLSAIVNP
QRIQPTTIEF VDIAGLVKGA SAGEGLGNQF LGHIRSVDAI IHVVRCFDDD NVVHVNGRVS
PAADIDTIHT ELGLSDLETV EKKLQRAEKA GRSGDRKLKD EAAFYQRVRD LLDQGKNVRG
VAENEDERLW LRDLHLLTDK PVLYVANVAE DDLGGEHPFV GQVQQIASLE GAGVVTICGK
LEAEISELEG EEKQAFLNDM GLAEAGLDRL IRSGYELLGL ITYFTAGVKE VRAWTITRGT
KAPQAAGVIH SDFEKGFIRA EVIAFDDFIA CNGEAGAKEK GLMRLEGKEY VVRDGDVMHF
RFNV
|
|---|
| |