Gene Ava_4625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4625 
Symbol 
ID3679994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5785109 
End bp5786200 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content42% 
IMG OID637719980 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_325117 
Protein GI75910821 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0369347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGAG CCGGAATTGT CGGACTTCCC AACGTTGGAA AATCTACTTT ATTTAATGCT 
GTAGTCGCTA ATGCCAAAGC AGAAGCGGCT AACTTCCCAT TCTGCACAAT TGAACCGAAT
GTCGGCGTAG TTGCAGTCCC AGATGAGCGG CTAAATGTGC TTTCACAAAT TTCCGGTTCG
GCACAAATTA TTCCCGCACG AGTTGAGTTT GTGGATATTG CCGGCTTAGT GAAAGGCGCA
AGCCAAGGTG AAGGATTAGG TAATCAATTT TTATCTCATA TCCGAGAAGT TGATGCGATC
GTTCATGTAG TACGTTGTTT TGAGAATGAT GATATCATCC ACGTTGCCGG TTCAGTTGAC
CCTGCAAGAG ATATTGAAAT CATTAGCATC GAATTGGGTT TATCAGATTT AGCTCAAATT
GAACGCCGGA TTGAACGCAC GCGTAAGCAA GCACGTACCA GCAAAGATGC ACAATTTGAG
ATCACAGTTT TAGAAAAGTT AGCTGCTGCC TTAAATGAAG GTAAATCAGT GCGGCAAATA
AGTTTAACTG AAGAAGAAGC GGAAATTATT AAGGGACTGG GACTGTTGAC AAATAAGCCG
ATTATTTACG CGGCTAATGT TTCTGAAGAA GAATTAGCAA CTGGTAATGA ATTTGTGGAA
AGAGTACGCC AAGTTGCAGC CCAGGAAAAT GCTCAAGTTG TGGTTGTTTC TGCTCAAGTA
GAAGCAGAAC TTGTAGAATT ACCGGAAGAA GACAAGGCGG ATTTTTTAGA ATCTTTAGGG
GTAAAAGAAG GCGGATTAAA ATCTTTGATT CGTGCTACTT ATGCTCTATT GGGATTACGG
ACTTATTTCA CCAGTGGACA AAAAGAAACC CGTGCTTGGA CAATCAATGC AGGAATGTCA
GCACCCCAAG CCGCAGGTGT AATTCACTCT GATTTTGAGC GAGGATTTAT TCGTGCGGAA
ACCGTTGCAT ACAATGATTT AGTTGCAAAT GGTTCTCTGA TCGCTGCAAA AGAAAAAGGG
TTAGTTCGCA GCGAAGGTAA AGAATATATT GTGCAGGAAG GTGATGTGAT GTTATTCCGA
TTTAACGTCT AA
 
Protein sequence
MLRAGIVGLP NVGKSTLFNA VVANAKAEAA NFPFCTIEPN VGVVAVPDER LNVLSQISGS 
AQIIPARVEF VDIAGLVKGA SQGEGLGNQF LSHIREVDAI VHVVRCFEND DIIHVAGSVD
PARDIEIISI ELGLSDLAQI ERRIERTRKQ ARTSKDAQFE ITVLEKLAAA LNEGKSVRQI
SLTEEEAEII KGLGLLTNKP IIYAANVSEE ELATGNEFVE RVRQVAAQEN AQVVVVSAQV
EAELVELPEE DKADFLESLG VKEGGLKSLI RATYALLGLR TYFTSGQKET RAWTINAGMS
APQAAGVIHS DFERGFIRAE TVAYNDLVAN GSLIAAKEKG LVRSEGKEYI VQEGDVMLFR
FNV