Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4625 |
Symbol | |
ID | 3679994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5785109 |
End bp | 5786200 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637719980 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_325117 |
Protein GI | 75910821 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0369347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAAGAG CCGGAATTGT CGGACTTCCC AACGTTGGAA AATCTACTTT ATTTAATGCT GTAGTCGCTA ATGCCAAAGC AGAAGCGGCT AACTTCCCAT TCTGCACAAT TGAACCGAAT GTCGGCGTAG TTGCAGTCCC AGATGAGCGG CTAAATGTGC TTTCACAAAT TTCCGGTTCG GCACAAATTA TTCCCGCACG AGTTGAGTTT GTGGATATTG CCGGCTTAGT GAAAGGCGCA AGCCAAGGTG AAGGATTAGG TAATCAATTT TTATCTCATA TCCGAGAAGT TGATGCGATC GTTCATGTAG TACGTTGTTT TGAGAATGAT GATATCATCC ACGTTGCCGG TTCAGTTGAC CCTGCAAGAG ATATTGAAAT CATTAGCATC GAATTGGGTT TATCAGATTT AGCTCAAATT GAACGCCGGA TTGAACGCAC GCGTAAGCAA GCACGTACCA GCAAAGATGC ACAATTTGAG ATCACAGTTT TAGAAAAGTT AGCTGCTGCC TTAAATGAAG GTAAATCAGT GCGGCAAATA AGTTTAACTG AAGAAGAAGC GGAAATTATT AAGGGACTGG GACTGTTGAC AAATAAGCCG ATTATTTACG CGGCTAATGT TTCTGAAGAA GAATTAGCAA CTGGTAATGA ATTTGTGGAA AGAGTACGCC AAGTTGCAGC CCAGGAAAAT GCTCAAGTTG TGGTTGTTTC TGCTCAAGTA GAAGCAGAAC TTGTAGAATT ACCGGAAGAA GACAAGGCGG ATTTTTTAGA ATCTTTAGGG GTAAAAGAAG GCGGATTAAA ATCTTTGATT CGTGCTACTT ATGCTCTATT GGGATTACGG ACTTATTTCA CCAGTGGACA AAAAGAAACC CGTGCTTGGA CAATCAATGC AGGAATGTCA GCACCCCAAG CCGCAGGTGT AATTCACTCT GATTTTGAGC GAGGATTTAT TCGTGCGGAA ACCGTTGCAT ACAATGATTT AGTTGCAAAT GGTTCTCTGA TCGCTGCAAA AGAAAAAGGG TTAGTTCGCA GCGAAGGTAA AGAATATATT GTGCAGGAAG GTGATGTGAT GTTATTCCGA TTTAACGTCT AA
|
Protein sequence | MLRAGIVGLP NVGKSTLFNA VVANAKAEAA NFPFCTIEPN VGVVAVPDER LNVLSQISGS AQIIPARVEF VDIAGLVKGA SQGEGLGNQF LSHIREVDAI VHVVRCFEND DIIHVAGSVD PARDIEIISI ELGLSDLAQI ERRIERTRKQ ARTSKDAQFE ITVLEKLAAA LNEGKSVRQI SLTEEEAEII KGLGLLTNKP IIYAANVSEE ELATGNEFVE RVRQVAAQEN AQVVVVSAQV EAELVELPEE DKADFLESLG VKEGGLKSLI RATYALLGLR TYFTSGQKET RAWTINAGMS APQAAGVIHS DFERGFIRAE TVAYNDLVAN GSLIAAKEKG LVRSEGKEYI VQEGDVMLFR FNV
|
| |