22 homologs were found in PanDaTox collection
for query gene TM1040_3181 on replicon NC_008043
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008043  TM1040_3181  LuxR family transcriptional regulator  100 
 
 		 267 aa  554  1e-157  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.484185 
 
 
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NC_008042  TM1040_3808  LuxR family transcriptional regulator  53.88 
 
 		 266 aa  294  1e-78  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
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NC_007643  Rru_A2179  LuxR family transcriptional regulator  24.55 
 
 		 239 aa  49.7  0.00005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
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NC_010623  Bphy_4439  LuxR family transcriptional regulator  24.39 
 
 		 234 aa  47.8  0.0002  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
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NC_007802  Jann_1153  LuxR family transcriptional regulator  24.81 
 
 		 243 aa  47  0.0003  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.446836 
 
 
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NC_010676  Bphyt_4277  transcriptional regulator, LuxR family  26.26 
 
 		 234 aa  47  0.0004  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.343912 
 
 
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NC_013946  Mrub_0655  two component LuxR family transcriptional regulator  44.44 
 
 		 194 aa  46.2  0.0006  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
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NC_004310  BR0190  LuxR family transcriptional regulator  27.18 
 
 		 235 aa  46.2  0.0006  Brucella suis 1330  Bacteria  normal  0.195449  n/a   
 
 
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NC_013440  Hoch_3098  transcriptional regulator, LuxR family  25.89 
 
 		 254 aa  45.8  0.0008  Haliangium ochraceum DSM 14365  Bacteria  normal  0.521704  normal  0.269359 
 
 
-
 
NC_009049  Rsph17029_1758  autoinducer-binding domain-containing protein  22.98 
 
 		 233 aa  45.8  0.0008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009505  BOV_0183  LuxR family transcriptional regulator  27.18 
 
 		 235 aa  45.4  0.0008  Brucella ovis ATCC 25840  Bacteria  normal  0.0816251  n/a   
 
 
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NC_007493  RSP_0122  LuxR family transcriptional regulator  22.98 
 
 		 233 aa  45.8  0.0008  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0896  LuxR family transcriptional regulator  29.57 
 
 		 214 aa  45.4  0.001  Coxiella burnetii RSA 331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007952  Bxe_B0610  LuxR family transcriptional regulator  25 
 
 		 234 aa  43.9  0.003  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.317613 
 
 
-
 
NC_009727  CBUD_0998  response regulator  29.57 
 
 		 214 aa  43.9  0.003  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_0920  LuxR family transcriptional regulator  25.7 
 
 		 268 aa  43.5  0.003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.81926  normal  0.148698 
 
 
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NC_009667  Oant_0198  autoinducer-binding domain-containing protein  29.63 
 
 		 235 aa  42.7  0.006  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00000129067  n/a   
 
 
-
 
NC_006368  lpp2317  hypothetical protein  25.68 
 
 		 267 aa  42.7  0.006  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_0253  two component transcriptional regulator, LuxR family  36.26 
 
 		 218 aa  42.7  0.007  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.649746 
 
 
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NC_008043  TM1040_3273  LuxR family transcriptional regulator  40.26 
 
 		 185 aa  42.4  0.008  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
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NC_012852  Rleg_6196  transcriptional regulator, LuxR family  38.57 
 
 		 275 aa  42  0.009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_0097  transcriptional regulator, LuxR family  21.72 
 
 		 244 aa  42  0.01  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
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