Gene Rleg_6196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6196 
Symbol 
ID8016209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp240908 
End bp241735 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content59% 
IMG OID644827502 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_002978702 
Protein GI241258818 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGACG ACCCCATTCG TGACGACCCC ATTCTTGACG ATATCGGAAC GATCAGACGG 
CAGTTTACAG CGCACGAAAC GCTTGATGGA CGCATCGACC AGGCCTTCGA GGCGATGAAG
CAGATAGGCT TCGAGGCGCT GATCTACGAC TATACACCGG TGCCTTACGA TCTCGACGGC
GCGATCATGA TACCATCGCT GCTGAAGCTG CGGAATATCT CCGACGATAT GCACGATTAC
TGGTTCAATC GCGGCTATTT CCGTATCGAT CCGGTGCAGC AGGTGGCGCT GCGCACCTCC
GCGCCCTTCT TCTGGAACTA CGACCCGGAC GCCGACACGC TGATCAACCG TTTCATGACC
GAAGACACCG CGCCGGTGAC GCGCTATTTG AGCGAACGCG ATATGTCGAC CGGCGTCACC
GTTCCGGTTC ATATGCCACG CGGCGACTAT GCGACCGTCA CCGGCATCCG CTTCGGCCGG
AACAAAGATT TCGAGCGGCA CGCACTGCGC TATATCGCCG ACTTCAACCT GCTTGCCCAT
GTTTTCCATG AGACCGCCTA TTCGCTTTTC GACACGCGGG CGAAGAGCGT CGGCACGATC
CGCCTGACCG AGCGGGAACG TGAATGCCTG CGCCATTCGG CGGAAGGTTA CTCCGCCAAG
GAAATTTCCC GCATCATCGA CCGTTCGGTA CCGACCGTCG TGATGCATCT GAACGCCGCG
ACAAAGAAAC TCGGCGCCCG CAACCGAACC CAGGCCGTGG TGCGCGCCAC CCATTACCGC
CTGCTCGAAG ACCGGCCTAC CCATAATTGG CCACCCTATA ACTTGTGA
 
Protein sequence
MLDDPIRDDP ILDDIGTIRR QFTAHETLDG RIDQAFEAMK QIGFEALIYD YTPVPYDLDG 
AIMIPSLLKL RNISDDMHDY WFNRGYFRID PVQQVALRTS APFFWNYDPD ADTLINRFMT
EDTAPVTRYL SERDMSTGVT VPVHMPRGDY ATVTGIRFGR NKDFERHALR YIADFNLLAH
VFHETAYSLF DTRAKSVGTI RLTERERECL RHSAEGYSAK EISRIIDRSV PTVVMHLNAA
TKKLGARNRT QAVVRATHYR LLEDRPTHNW PPYNL