| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4277 |
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| Symbol | |
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| ID | 6279560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 325754 |
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| End bp | 326458 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642615371 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_001888024 |
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| Protein GI | 187918993 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.343912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCGC TACTGGACGC CGCCGACGAA GCGGAATGGT TCGGTGCAAT CGCGGGCCTT
GCCGAGACGT GGGGCTTCGA CAAGCTTTTG ATCGCCATGC TGCCGCGCCC CACCATTCGC
CTGGAAGACG CTTACGTGCG CAGTACGTAC TCCCCAACCT GGCGACGTAC CTATGACGAG
CAGGGACTGG TTCACATCGA TCCGACCGTT GCGCATTGCG CGACGCGCGC CACGCCGCTG
ATCTGGTCGC CGGATATTTT CAAGACCGCG CCGCAGCTTT CCATGTACGA GGAAGCCCGC
GCGCATGGGT TGCGCTCCGG CATAACACTG CCGATTCACG GGCCGAATCA GGAAGCCGGC
ATGATGTGCT TCGTCAACGA CAACAATCCC AACGACGAAT TCTGGCGGCA TATCAACGTG
GCATTGCCGA ACCTGGTGTT ATTGCGCGAC CTGGTAATCG ACACCAGTCA GCGCCATTTG
AATACGCACG CCCAGACCTT ATTGCCCAAG CTAACACCGC GCGAACGCGA ATGCCTGAAA
TGGACCGCAC GCGGCAAATC CACGTGGGAA ATCTCCCACA TCCTGAACTG TTCGGAAGCC
GTGGTGAACT TCCACATGAA GAACATCAGG ACGAAATTCG GTGTGAATTC GCGGCGTGCG
GCGGCGGTGA TTGCCGCGCA ACTTGGGCTT ATTGACCCGG GTTGA
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| Protein sequence | MAPLLDAADE AEWFGAIAGL AETWGFDKLL IAMLPRPTIR LEDAYVRSTY SPTWRRTYDE
QGLVHIDPTV AHCATRATPL IWSPDIFKTA PQLSMYEEAR AHGLRSGITL PIHGPNQEAG
MMCFVNDNNP NDEFWRHINV ALPNLVLLRD LVIDTSQRHL NTHAQTLLPK LTPRERECLK
WTARGKSTWE ISHILNCSEA VVNFHMKNIR TKFGVNSRRA AAVIAAQLGL IDPG
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