| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1153 |
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| Symbol | |
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| ID | 3933597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1115060 |
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| End bp | 1115791 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903501 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_509095 |
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| Protein GI | 89053644 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.446836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCTCGG TAGACGCCAT CATGGAACAG ATCCGCACAG CCCCGTCGCG CCGGGCGCTG
TGGCAAATCA TGCTGGACTT CATGCATGAC GAAGGGGTTG TGATGGGCAG CTATCATTTC
GTTGATGCCG ATGCCGCCTC CGTCAGGGTT GCCGCCGATG GCTTTCCTGA GGAGTGGATC
TGCGAATACC TGAACCGCAA GCTGGCGCTG ATTGATCCGA TCCCCGCCCT CGCGGCCCGC
ATGTCGAGGC CGTTCTACTG GCACGAAATC CAGGATCTGA TCCCTCCCTC GGCGCAGACC
GATGCCTATC TGGACCGGCT GCGCGCATCA GGCCTGGGCG ACGGGCTGGC GTTTTATGTG
TTCGGTCCCG GCCTGCGCAA CGCTTACGTG GGCCTCGGGT TTGGCCGACC TGTCGTCGAT
CTTCCCCCGG AGCAGATCTT TCGCCTGCAA TGCGTGGCCC AGGCCGGGCA TCTGCGGGTC
TGCGAGTTGA GCGATCAGGC CCCGAAAGAG GCGGCGCTGT CGCCGCGGGA AAAGCAGGTC
CTGGACTGGA TCGCAAAGGG CAAGAGCAAT TCGGTCATCG CCGAGATCCT GGCCATGTCC
CCGCACACCG TCGATGCCCA TGTCCGCAGC ATCTACCGCA AACTGGACGT GACCGACCGC
ACCAGCGCGG CCCTGCGCGG CGTGGGGTCC GGCGTGCTGC AATATCCCGG GATCGACACC
GCCACGTCGT GA
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| Protein sequence | MTSVDAIMEQ IRTAPSRRAL WQIMLDFMHD EGVVMGSYHF VDADAASVRV AADGFPEEWI
CEYLNRKLAL IDPIPALAAR MSRPFYWHEI QDLIPPSAQT DAYLDRLRAS GLGDGLAFYV
FGPGLRNAYV GLGFGRPVVD LPPEQIFRLQ CVAQAGHLRV CELSDQAPKE AALSPREKQV
LDWIAKGKSN SVIAEILAMS PHTVDAHVRS IYRKLDVTDR TSAALRGVGS GVLQYPGIDT
ATS
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