| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3181 |
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| Symbol | |
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| ID | 4075351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 166163 |
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| End bp | 166966 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638004684 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_611417 |
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| Protein GI | 99078159 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.484185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACA TTCCCAAGAT CATGACTCAG ATCCTCGAGG CACCGACGCT CGAGCAGAAG
TATCGTGTTT TTGCCGATTT CATGGAAGGT GAGTTCGGGT ATGTGGGCGT GAACTACGGT
ATTTTTCTGG ATGCGCGCTC CGCGCAGGCG ATCAGCAATC ATTTTATTGC AAAACGCATG
GGGATGTCTT CGGAATGGCG AGAGATTTAC CAGAAACAGG GGTATGGGCG GCGTGATCTT
GCGATGATGA TGGGCGCCGT GACCAAACGC CCGATTTTGC AAACCCAATT TTACCAGATG
CAGCGGCAAG ACGACATTCC AAAGCCCTAT GCAGAGGTCA TCGAAGGCGT GCATGATTTT
GTAAAGTGCG GCGTGGTCCT GCCTGTCTAT GCAAATGGTC GCAAGGGCGT TGTTGGCCTT
TATGATCCCA AAGGCGATGC TGCAAAACAC GATGAGAAAT ACCGAAAATA CGGCACGCTG
ATCGAAGCAC TGGCACGCCA TCTCCATGTG TCGTCCAGCT GGGCAGAGGA AACCATCGCG
CAGACCAGGC TAAGCGAAAT GAACCTGCGT GTGCTGCGTC TCAAGGCGCG CGGTCTGCGC
GTGAAAGAGA TCTTGCACCA GATCGAGCGC GACAATCCCA AGACGGTCGA CAATCATATG
GCGCGGGTGC GCCGGTCTCT GGGCGCGCGC AATGACGTCG AAGCGGTTGC CAAGGCCGCC
ACATTGGGGC TGCTGGAGCC ATCAGGCGAC CCCTTTGACC ACGAGGGTGC CGATATTCTC
CCCCGGGGGA TTGGCCGGAC GTGA
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| Protein sequence | MSDIPKIMTQ ILEAPTLEQK YRVFADFMEG EFGYVGVNYG IFLDARSAQA ISNHFIAKRM
GMSSEWREIY QKQGYGRRDL AMMMGAVTKR PILQTQFYQM QRQDDIPKPY AEVIEGVHDF
VKCGVVLPVY ANGRKGVVGL YDPKGDAAKH DEKYRKYGTL IEALARHLHV SSSWAEETIA
QTRLSEMNLR VLRLKARGLR VKEILHQIER DNPKTVDNHM ARVRRSLGAR NDVEAVAKAA
TLGLLEPSGD PFDHEGADIL PRGIGRT
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