| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0610 |
|---|
| Symbol | |
|---|
| ID | 4008901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2694331 |
|---|
| End bp | 2695035 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637952071 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_554691 |
|---|
| Protein GI | 91779483 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.317613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCGC TACTGAACGC CGCCGACGAA GCGGAATGGT TCGGTACAAT CGCGGGCCTC
GTCGAGACAT GGGGCTTCGA GAAGCTGTTG ATCGCGATGC TGCCGCGCCC GACCATCCGC
CTCGAAGACG CGTATGTGCG CAGCACGTAC TCGCCCATCT GGCGCCGTAC TTACGACGAG
CAGGGACTGG TTCACATCGA TCCCACGGTC TCGCACTGCG CGACGCGCGC CACCCCGCTA
ATCTGGTCGC CGGACATTTT CACCACTGCG CCCCAGCAAT CCATGTACGA AGAAGCGCGC
GCGCACGGAT TGCGCGCCGG CGTGACACTG CCGATTCATG GGCCGAACCA GGAAGCCGGC
ATGATGTGCT TCGTCAATGA CAGCAATCCC AACGACGAAT TCTGGCAGCA TATCAACGTG
GCATTGCCGA ATCTGGTATT ACTGCGCGAT CTGGTAATCG ATACCAGCCA GCGGCATTTG
AATACGCACG CTCAGACCTT GTTGCCCAAA TTGACGCCGC GTGAGCGCGA ATGCCTGAAA
TGGACCGCAC GCGGCAAATC CACCTGGGAA ATCTCCCACA TCCTGAACTG TTCGGAAGCC
GTGGTGAACT TCCACATGAA GAACATCAGG ACCAAATTCG GTGTGAATTC GCGGCGTGCG
GCAGCCGTGA TTGCAACCCA GCTCGGGCTT ATTGACCCGG GTTGA
|
|---|
| Protein sequence | MAPLLNAADE AEWFGTIAGL VETWGFEKLL IAMLPRPTIR LEDAYVRSTY SPIWRRTYDE
QGLVHIDPTV SHCATRATPL IWSPDIFTTA PQQSMYEEAR AHGLRAGVTL PIHGPNQEAG
MMCFVNDSNP NDEFWQHINV ALPNLVLLRD LVIDTSQRHL NTHAQTLLPK LTPRERECLK
WTARGKSTWE ISHILNCSEA VVNFHMKNIR TKFGVNSRRA AAVIATQLGL IDPG
|
|---|
| |