More than 300 homologs were found in PanDaTox collection
for query gene Bind_0920 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_0920  LuxR family transcriptional regulator  100 
 
 
268 aa  560  1.0000000000000001e-159  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.81926  normal  0.148698 
 
 
-
 
NC_011666  Msil_0097  transcriptional regulator, LuxR family  63.33 
 
 
244 aa  337  9.999999999999999e-92  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011666  Msil_3348  transcriptional regulator, LuxR family  43.23 
 
 
238 aa  210  2e-53  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011666  Msil_0694  transcriptional regulator, LuxR family  39.22 
 
 
242 aa  190  2e-47  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_5194  LuxR family transcriptional regulator  36.02 
 
 
242 aa  146  3e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0681352 
 
 
-
 
NC_009952  Dshi_2852  transcriptional regulator  37.33 
 
 
236 aa  145  6e-34  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2210  LuxR family transcriptional regulator  31.73 
 
 
240 aa  131  1.0000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2028  LuxR family transcriptional regulator  32.39 
 
 
242 aa  120  3e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0122  LuxR family transcriptional regulator  36.07 
 
 
233 aa  117  1.9999999999999998e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1758  autoinducer-binding domain-containing protein  36.07 
 
 
233 aa  117  1.9999999999999998e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1709  autoinducer-binding domain-containing protein  36.61 
 
 
233 aa  115  1.0000000000000001e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.781724  normal 
 
 
-
 
NC_009621  Smed_5781  response regulator receiver protein  30.3 
 
 
243 aa  108  7.000000000000001e-23  Sinorhizobium medicae WSM419  Bacteria  normal  0.305702  hitchhiker  0.00700374 
 
 
-
 
NC_012850  Rleg_2928  transcriptional regulator, LuxR family  29.68 
 
 
241 aa  107  1e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.258432  normal 
 
 
-
 
NC_008043  TM1040_3102  LuxR family transcriptional regulator  30.93 
 
 
239 aa  106  4e-22  Ruegeria sp. TM1040  Bacteria  normal  0.644499  normal 
 
 
-
 
NC_011369  Rleg2_2667  transcriptional regulator, LuxR family  29.68 
 
 
241 aa  106  5e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.530563  normal 
 
 
-
 
NC_009636  Smed_1559  regulatory protein LuxR  28.11 
 
 
246 aa  100  3e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.509292 
 
 
-
 
NC_011894  Mnod_1003  transcriptional regulator, LuxR family  31.48 
 
 
245 aa  99.4  6e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.383688  n/a   
 
 
-
 
NC_008228  Patl_0359  LuxR family transcriptional regulator  31.67 
 
 
248 aa  94.7  1e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.870907  n/a   
 
 
-
 
NC_007958  RPD_0402  regulatory protein, LuxR  32.69 
 
 
242 aa  94  2e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009475  BBta_p0260  LuxR family transcriptional regulator  32.84 
 
 
243 aa  93.2  4e-18  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal 
 
 
-
 
NC_007778  RPB_0418  LuxR family transcriptional regulator  32.21 
 
 
242 aa  93.2  4e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1709  transcriptional regulator, LuxR family  28.02 
 
 
251 aa  92.8  5e-18  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0460  transcriptional regulator, LuxR family  35.11 
 
 
253 aa  92.8  6e-18  Ralstonia pickettii 12J  Bacteria  normal  normal  0.343765 
 
 
-
 
NC_007614  Nmul_A2417  LuxR family transcriptional regulator  31.86 
 
 
244 aa  91.7  1e-17  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3098  transcriptional regulator, LuxR family  32.39 
 
 
254 aa  92  1e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.521704  normal  0.269359 
 
 
-
 
NC_007643  Rru_A3395  LuxR family transcriptional regulator  32.5 
 
 
260 aa  90.9  2e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007961  Nham_4558  LuxR family transcriptional regulator  33.16 
 
 
234 aa  90.1  3e-17  Nitrobacter hamburgensis X14  Bacteria  normal  0.534127  n/a   
 
 
-
 
NC_011004  Rpal_0323  transcriptional regulator, LuxR family  32.69 
 
 
243 aa  88.2  1e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3898  transcriptional regulator LasR  28.88 
 
 
239 aa  86.7  3e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  0.219668  n/a   
 
 
-
 
NC_010505  Mrad2831_5762  LuxR family transcriptional regulator  29.13 
 
 
242 aa  87  3e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.225342  normal 
 
 
-
 
NC_007517  Gmet_1513  LuxR family transcriptional regulator  32.07 
 
 
246 aa  86.7  4e-16  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000493267  normal 
 
 
-
 
NC_008254  Meso_1407  LuxR family transcriptional regulator  28.45 
 
 
241 aa  86.7  4e-16  Chelativorans sp. BNC1  Bacteria  normal  0.959158  n/a   
 
 
-
 
NC_008463  PA14_45960  transcriptional regulator LasR  28.88 
 
 
239 aa  85.9  6e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0943  transcriptional regulator, LuxR family  29.29 
 
 
242 aa  85.9  7e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3500  LuxR family transcriptional regulator  31.82 
 
 
247 aa  85.1  0.000000000000001  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.547243 
 
 
-
 
NC_008061  Bcen_3643  LuxR family transcriptional regulator  33.86 
 
 
239 aa  85.1  0.000000000000001  Burkholderia cenocepacia AU 1054  Bacteria  hitchhiker  0.00106494  n/a   
 
 
-
 
NC_008543  Bcen2424_4724  LuxR family transcriptional regulator  33.86 
 
 
239 aa  85.1  0.000000000000001  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.000522863  hitchhiker  0.00659366 
 
 
-
 
NC_010515  Bcenmc03_5576  LuxR family transcriptional regulator  33.86 
 
 
239 aa  85.1  0.000000000000001  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000012464  normal  0.015154 
 
 
-
 
NC_004578  PSPTO_4539  transcriptional regulator, LuxR family, autoinducer-regulated  30.32 
 
 
254 aa  84  0.000000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1570  ATP-dependent transcription regulator LuxR  31.28 
 
 
236 aa  83.6  0.000000000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  0.778317  n/a   
 
 
-
 
NC_012912  Dd1591_0100  transcriptional regulator, LuxR family  26.96 
 
 
250 aa  83.6  0.000000000000003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0142  N-acyl-homoserine lactone dependent regulatory protein  31.28 
 
 
234 aa  83.2  0.000000000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0163426  n/a   
 
 
-
 
NC_009667  Oant_0198  autoinducer-binding domain-containing protein  29.84 
 
 
235 aa  83.2  0.000000000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00000129067  n/a   
 
 
-
 
NC_009075  BURPS668_A1652  ATP-dependent transcription regulator LuxR  31.28 
 
 
234 aa  83.2  0.000000000000004  Burkholderia pseudomallei 668  Bacteria  normal  0.643432  n/a   
 
 
-
 
NC_007005  Psyr_4216  regulatory protein, LuxR  30.32 
 
 
254 aa  83.2  0.000000000000005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1052  LuxR family transcriptional regulator  33.33 
 
 
239 aa  82.8  0.000000000000005  Burkholderia sp. 383  Bacteria  hitchhiker  0.00000000445716  normal  0.182523 
 
 
-
 
NC_010725  Mpop_5029  transcriptional regulator, LuxR family  30.88 
 
 
243 aa  82.8  0.000000000000006  Methylobacterium populi BJ001  Bacteria  normal  0.771298  normal  0.575652 
 
 
-
 
NC_010676  Bphyt_4277  transcriptional regulator, LuxR family  30.92 
 
 
234 aa  82.4  0.000000000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.343912 
 
 
-
 
NC_007778  RPB_3321  LuxR family transcriptional regulator  34.54 
 
 
240 aa  82.4  0.000000000000007  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.214587 
 
 
-
 
NC_011313  VSAL_II0965  transcriptional activator protein LuxR  28.5 
 
 
248 aa  82  0.000000000000008  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.266935  n/a   
 
 
-
 
NC_010623  Bphy_4439  LuxR family transcriptional regulator  28.08 
 
 
234 aa  82  0.000000000000009  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009717  Xaut_4889  autoinducer-binding domain-containing protein  31.44 
 
 
233 aa  81.6  0.00000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.70592  normal  0.843155 
 
 
-
 
NC_007952  Bxe_B0610  LuxR family transcriptional regulator  31.07 
 
 
234 aa  82  0.00000000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.317613 
 
 
-
 
NC_012792  Vapar_5809  transcriptional regulator, LuxR family  32.11 
 
 
235 aa  80.5  0.00000000000002  Variovorax paradoxus S110  Bacteria  normal  0.962539  n/a   
 
 
-
 
NC_010172  Mext_4514  autoinducer-binding domain-containing protein  32.34 
 
 
243 aa  80.1  0.00000000000003  Methylobacterium extorquens PA1  Bacteria  normal  0.447162  normal 
 
 
-
 
NC_007650  BTH_II1231  ATP-dependent transcription regulator LuxR  30.26 
 
 
234 aa  80.5  0.00000000000003  Burkholderia thailandensis E264  Bacteria  normal  0.681253  n/a   
 
 
-
 
NC_009483  Gura_3112  regulatory protein, LuxR  32.61 
 
 
250 aa  80.1  0.00000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_5810  LuxR family transcriptional regulator  28.88 
 
 
228 aa  80.1  0.00000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.809704  normal 
 
 
-
 
NC_008392  Bamb_6040  LuxR family transcriptional regulator  28.88 
 
 
228 aa  80.1  0.00000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.917081 
 
 
-
 
NC_011757  Mchl_4977  transcriptional regulator, LuxR family  32.34 
 
 
243 aa  80.1  0.00000000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.637652  normal  0.142556 
 
 
-
 
NC_006349  BMAA1345  N-acyl homoserine lactone transcriptional regulator  34.03 
 
 
239 aa  79.7  0.00000000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1442  transcriptional regulator, LuxR family  27.78 
 
 
245 aa  80.1  0.00000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.600459  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2485  BpsR  34.03 
 
 
239 aa  79.7  0.00000000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0962  autoinducer-binding transcriptional regulator BpsR  34.03 
 
 
239 aa  79.7  0.00000000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1295  autoinducer-binding transcriptional regulator BpsR  34.03 
 
 
239 aa  79.7  0.00000000000004  Burkholderia pseudomallei 668  Bacteria  normal  0.312538  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1223  autoinducer-binding transcriptional regulator BpsR  34.03 
 
 
239 aa  79.7  0.00000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0329  autoinducer-binding transcriptional regulator BpsR  34.03 
 
 
239 aa  79.7  0.00000000000004  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3971  LuxR family transcriptional regulator  32.8 
 
 
239 aa  79.7  0.00000000000004  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.000126265  normal  0.0321799 
 
 
-
 
NC_008835  BMA10229_0607  autoinducer-binding transcriptional regulator BpsR  34.03 
 
 
239 aa  79.7  0.00000000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  0.83559  n/a   
 
 
-
 
NC_010552  BamMC406_4581  LuxR family transcriptional regulator  32.8 
 
 
239 aa  79.7  0.00000000000005  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.00000141763  hitchhiker  0.0000089809 
 
 
-
 
NC_008391  Bamb_4116  LuxR family transcriptional regulator  32.8 
 
 
239 aa  79.3  0.00000000000005  Burkholderia ambifaria AMMD  Bacteria  normal  0.0201758  hitchhiker  0.00877352 
 
 
-
 
NC_013422  Hneap_0963  transcriptional regulator, LuxR family  27.64 
 
 
237 aa  79.3  0.00000000000005  Halothiobacillus neapolitanus c2  Bacteria  normal  0.27907  n/a   
 
 
-
 
NC_007650  BTH_II1510  ATP-dependent transcription regulator LuxR  34.03 
 
 
239 aa  79.3  0.00000000000006  Burkholderia thailandensis E264  Bacteria  normal  0.08907  n/a   
 
 
-
 
NC_013421  Pecwa_1836  transcriptional regulator, LuxR family  26.4 
 
 
245 aa  79.3  0.00000000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  0.28867  n/a   
 
 
-
 
NC_007406  Nwi_0627  LuxR family transcriptional regulator  30.21 
 
 
241 aa  77.8  0.0000000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.253164  normal 
 
 
-
 
NC_010514  Mrad2831_6378  LuxR family transcriptional regulator  29.25 
 
 
248 aa  77.8  0.0000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_007960  Nham_4435  LuxR family transcriptional regulator  29.02 
 
 
231 aa  77.4  0.0000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3810  LuxR family transcriptional regulator  29.57 
 
 
242 aa  77.8  0.0000000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0127  transcriptional regulator, LuxR family  27.06 
 
 
236 aa  77.8  0.0000000000002  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010517  Mrad2831_6408  LuxR family transcriptional regulator  29.25 
 
 
248 aa  77.8  0.0000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_013421  Pecwa_4428  transcriptional regulator, LuxR family  25.71 
 
 
245 aa  77  0.0000000000003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5462  LuxR family transcriptional regulator  28.7 
 
 
245 aa  77  0.0000000000003  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.191354 
 
 
-
 
NC_003295  RSc3287  transcriptional activator SOLR transcription regulator protein  30.05 
 
 
236 aa  76.6  0.0000000000004  Ralstonia solanacearum GMI1000  Bacteria  normal  0.840181  normal 
 
 
-
 
NC_011761  AFE_1997  autoinducer-binding transcriptional regulator, LuxR family  30.69 
 
 
237 aa  76.3  0.0000000000004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.448669  n/a   
 
 
-
 
NC_011206  Lferr_1664  transcriptional regulator, LuxR family  30.69 
 
 
237 aa  76.3  0.0000000000004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.888844 
 
 
-
 
NC_010557  BamMC406_5699  LuxR family transcriptional regulator  28.72 
 
 
239 aa  75.9  0.0000000000006  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0607724 
 
 
-
 
NC_007960  Nham_4396  LuxR family transcriptional regulator  29.38 
 
 
228 aa  75.9  0.0000000000007  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4299  LuxR family transcriptional regulator  31.09 
 
 
237 aa  74.7  0.000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.190696 
 
 
-
 
NC_010465  YPK_0791  LuxR family transcriptional regulator  26.6 
 
 
247 aa  75.1  0.000000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0720  LuxR family transcriptional regulator  26.6 
 
 
247 aa  75.1  0.000000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A0182  LuxR family transcriptional regulator  26.6 
 
 
247 aa  75.1  0.000000000001  Yersinia pestis Angola  Bacteria  hitchhiker  0.00268604  hitchhiker  0.00000585836 
 
 
-
 
NC_011894  Mnod_1766  transcriptional regulator, LuxR family  26.92 
 
 
244 aa  75.1  0.000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.182775  n/a   
 
 
-
 
NC_008061  Bcen_4980  LuxR family transcriptional regulator  31.09 
 
 
237 aa  74.7  0.000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3180  LuxR family transcriptional regulator  31.09 
 
 
237 aa  74.7  0.000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.100011 
 
 
-
 
NC_004310  BR0190  LuxR family transcriptional regulator  27.5 
 
 
235 aa  74.7  0.000000000002  Brucella suis 1330  Bacteria  normal  0.195449  n/a   
 
 
-
 
NC_009505  BOV_0183  LuxR family transcriptional regulator  27.5 
 
 
235 aa  74.3  0.000000000002  Brucella ovis ATCC 25840  Bacteria  normal  0.0816251  n/a   
 
 
-
 
NC_009656  PSPA7_1649  transcriptional regulator RhlR  29.57 
 
 
224 aa  73.9  0.000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.458186  n/a   
 
 
-
 
NC_009485  BBta_4114  putative transcriptional activator  26.56 
 
 
213 aa  73.9  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.605496  normal  0.314154 
 
 
-
 
NC_003296  RS01929  transcriptional activator of quorum sensing autoinducer synthesis transcription regulator protein  28.57 
 
 
248 aa  73.9  0.000000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.746701 
 
 
-
 
NC_010515  Bcenmc03_4279  LuxR family transcriptional regulator  28.28 
 
 
321 aa  73.9  0.000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.189781  normal  0.0123236 
 
 
-
 
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