18 homologs were found in PanDaTox collection
for query gene Syncc9605_0888 on replicon NC_007516
Organism: Synechococcus sp. CC9605



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007516  Syncc9605_0888  hypothetical protein  100 
 
 
300 aa  607  1e-173  Synechococcus sp. CC9605  Bacteria  normal  0.475505  normal 
 
 
-
 
NC_007513  Syncc9902_1510  hypothetical protein  75.67 
 
 
317 aa  469  1.0000000000000001e-131  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4572  phytanoyl-CoA dioxygenase  45.39 
 
 
321 aa  227  2e-58  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3963  phytanoyl-CoA dioxygenase  37.05 
 
 
341 aa  152  7e-36  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.362258 
 
 
-
 
NC_011894  Mnod_1940  phytanoyl-CoA dioxygenase  37.16 
 
 
355 aa  148  9e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8686  phytanoyl-CoA dioxygenase  36.82 
 
 
354 aa  146  5e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5428  Phytanoyl-CoA dioxygenase  37.11 
 
 
339 aa  145  7.0000000000000006e-34  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0395279 
 
 
-
 
NC_010511  M446_0322  phytanoyl-CoA dioxygenase  36.91 
 
 
355 aa  145  9e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3918  phytanoyl-CoA dioxygenase  36.04 
 
 
347 aa  140  1.9999999999999998e-32  Pseudomonas putida F1  Bacteria  normal  0.117888  normal 
 
 
-
 
NC_011892  Mnod_8688  Phytanoyl-CoA dioxygenase  35.39 
 
 
326 aa  137  2e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6410  Phytanoyl-CoA dioxygenase  35.39 
 
 
326 aa  137  3.0000000000000003e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1839  Phytanoyl-CoA dioxygenase  33.88 
 
 
383 aa  128  1.0000000000000001e-28  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_011892  Mnod_8687  Phytanoyl-CoA dioxygenase  31.8 
 
 
346 aa  116  3.9999999999999997e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3760  Phytanoyl-CoA dioxygenase  31.8 
 
 
346 aa  114  3e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1911  phytanoyl-CoA dioxygenase  31.48 
 
 
456 aa  106  5e-22  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0015  phytanoyl-CoA dioxygenase  29.68 
 
 
346 aa  90.9  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.349617  normal  0.130137 
 
 
-
 
NC_013037  Dfer_1903  Phytanoyl-CoA dioxygenase  22.63 
 
 
254 aa  45.8  0.0008  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.825715  normal 
 
 
-
 
NC_011988  Avi_5904  hypothetical protein  32.46 
 
 
319 aa  42.4  0.009  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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