| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_1911 |
|---|
| Symbol | |
|---|
| ID | 6134518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 2135338 |
|---|
| End bp | 2136708 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641642150 |
|---|
| Product | phytanoyl-CoA dioxygenase |
|---|
| Protein accession | YP_001768818 |
|---|
| Protein GI | 170740163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTA CAGTTTCGCG CCTCCTCCTG GCTCCGATCC ACGCCATCCA GGTGCTCACC
GGGGCAAAAT CTTTCCGAAG CAATCCGATC CTCGGCAGTG CTTCCTTGAA CCGCCGCGGG
CTGCACGTCT GGCGCGTCAA CACGGCCACC GCCCTCACGG CGCGGAGACG ACGGCGCCTG
GCCTCGCTGG TGAGCGCGGA GGACCAGCGG CAGCTCGATG AGCAGGGCTA CCTCGAGGTG
CGCGACTTCC TCGAACCGGG GCACTTCGCC GACCTCGTGC AGGAGGTCAC CTCGGTCGCA
CTCCCCGCCA GACAGTTTCG CGAGGGAGAC GCCGTCACGC GACGCGTCCC GCTGACCCTG
GCAACCCTGC GCCAACTCCC GGCCTGCCGG CGGCTCCTCG AAATGCCCGG CTTCCAGGGT
CGGCTGCGCT ACGTGGCGAG CTTCGACGTG GAGCCGGAGG TTTATATCCA GACGATCTTC
TCCCAGCTCG ACGGCTCACA AGCCGATCCA CAGCTCGACC TCCACATGGA CACGTTTCAT
CCAACCATGA AGGCGTGGCT GTTCCTGCAC GACGTGCCGG AGGATGAGGG TCCCTTCACC
TATGTGCGCG GCTCGGCCAC CCGCTCGAAG CGGCGCCTTG CCTGGGAGCG GCGCAAGAGC
GTGGAGGCCT GTGATCCAAC CAAGGCGGGA GGGGGCGGCG CATTCCGGAT CCGCCCGGAG
GAGCTGCCCC GTCTGGGCCT CTCGGCCCCC GTCAAGTTCG CGGTCCCGGG CAACACCCTG
GTGGTGGGCG ACACGTGCGG CTTCCACGCC CGGGGCGCAA CGGTCCGTCC AGGCGTCCGC
ATCGAGATCT ACGCCGCCAA CCGCCGCAAC CCGTTCCTGC CCTTCGTCGG GCTCGATCCG
TGGTCTCTAC CTCTCCTCCG GCGCCGCAAG ATCCCCCTGT TCTGGAGCTT GCTGGCGCTG
GGGGGCGGGT CGGCGTCATT CGGAGCCAGT GGCGGAACGG CGGTCGAGTT CGCGCCGGCG
ACCCGGTTCT GCCAGTGGTC GATCTGTCCA TCCCTGATGG GATGGTGGGC TGGGGAGAGG
GGATGGCTTC GCCTGTGTGG GGCGAAGCCT GACAGACCTG ACGGGCCGGA GCCGCCGTAC
GAGCCGGTCA CGGAGCAATG GACGAAACCC TGTCGGGGAG GCCGCGGTCA GGCGGTCGGC
CTTTACTCGC CGCTTCACCT CCGAGGAGGT CTGACGCGGA GCGAGCCGGG GGGCCATCGA
TCAGCGACCC GGCTGTCCGT GGGGTCGGGG CGACCCAGTC CCACTCCTGC GGCCCGGAGG
CCGCTTGCTG GCCGGTGCCG TCCGGCTTGT TGCGCGGTCG CCCGGACCTG A
|
|---|
| Protein sequence | MAATVSRLLL APIHAIQVLT GAKSFRSNPI LGSASLNRRG LHVWRVNTAT ALTARRRRRL
ASLVSAEDQR QLDEQGYLEV RDFLEPGHFA DLVQEVTSVA LPARQFREGD AVTRRVPLTL
ATLRQLPACR RLLEMPGFQG RLRYVASFDV EPEVYIQTIF SQLDGSQADP QLDLHMDTFH
PTMKAWLFLH DVPEDEGPFT YVRGSATRSK RRLAWERRKS VEACDPTKAG GGGAFRIRPE
ELPRLGLSAP VKFAVPGNTL VVGDTCGFHA RGATVRPGVR IEIYAANRRN PFLPFVGLDP
WSLPLLRRRK IPLFWSLLAL GGGSASFGAS GGTAVEFAPA TRFCQWSICP SLMGWWAGER
GWLRLCGAKP DRPDGPEPPY EPVTEQWTKP CRGGRGQAVG LYSPLHLRGG LTRSEPGGHR
SATRLSVGSG RPSPTPAARR PLAGRCRPAC CAVART
|
|---|
| |