| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8687 |
|---|
| Symbol | |
|---|
| ID | 7300874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011892 |
|---|
| Strand | - |
|---|
| Start bp | 422934 |
|---|
| End bp | 423974 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643597667 |
|---|
| Product | Phytanoyl-CoA dioxygenase |
|---|
| Protein accession | YP_002495243 |
|---|
| Protein GI | 220919940 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCA TGCTTTCGCG TGTGCTGCTC GCGCCCATCC ACGCCGCTCA GATCCTGACC
GGCGCCAAGT CCTTTCGGAC TAATCCCATT CTCGGCAGTG CCCGCCTGAA CCGGCGCGGG
CTGCACGTCT GGCGCGTCAA CACGGCTTCA GCGTTGACGG AGTGGCGGCG ACGGCGGCTG
GAGCATCTGG TGAGCGCTGA AGACCGCCGC CAGCTCGACG AGCAGGGCTA CGTCGAGACG
CGGGACTTCC TCTCGCCCGA GCACTTCGCG GAGTTGGTGC GCGAGGTCAC CTCGGTCGCG
CTGCCTGCCA AGCAGTTCCG GGAGGGCAAC GCAATCACCC GGCGCGTGCC CCTGACGCCG
GCCAATCTGC GCCACCTGCC GGCCTGCCGC CGCCTTCTCG CCCTGCCGGA GTTTCAGGGC
CGGCTGCGCT ACGTGGCGAG CTTCGACGTG GAGCCGGAGG TCTACATCCA GACCATCTTC
TCCCAGCTCG ACGGCCCCGC GGCCGATCCG CAGCTCGACC TGCACATGGA CACCTTCCAT
CCCACCATGA AGGCGTGGCT CTTCCTGCAC GACGTGCCGG CCGACGAGGG GCCGTTCACC
TATGTGCGCG GCTCGGCGAG CCGGACCAAG CGGCGGCTCG CTTGGGAGCG GCGCCGGAGC
ATTGAGGCGT GCGATCCCGC CAAGGCGGTG GGCGGCGCTT TTCGGATCCG GCCAGACGAG
CTGCCGCGTC TCGGCCTCTC GGAGCCCACT CAGTTCGCGG TGCCCGGCAA CACCCTCGTT
GTGGGGGACA CCTGCGGCTT CCATGCTCGG GGAGCGACGG TCCGTCCGGG TATTCGCATC
GAGATCTACG CCGCCAACCG TCGCAATCCG TTCCTGCCCT TCGTCGGCCT GGACCTGTGG
TCGGCTCCGC TGCTCAAGCG CCGCAAGATC GCCCTGTTCT GGGCGGCGCT CGCGCTCTGG
GAGCGCCTGG GGCTTGGCCG CAGCCAATGG CGCAACGGCG GGCAGGTCCG TGCAGGCGAT
CCGGTTCTGT CCGAGCCCTG A
|
|---|
| Protein sequence | MITMLSRVLL APIHAAQILT GAKSFRTNPI LGSARLNRRG LHVWRVNTAS ALTEWRRRRL
EHLVSAEDRR QLDEQGYVET RDFLSPEHFA ELVREVTSVA LPAKQFREGN AITRRVPLTP
ANLRHLPACR RLLALPEFQG RLRYVASFDV EPEVYIQTIF SQLDGPAADP QLDLHMDTFH
PTMKAWLFLH DVPADEGPFT YVRGSASRTK RRLAWERRRS IEACDPAKAV GGAFRIRPDE
LPRLGLSEPT QFAVPGNTLV VGDTCGFHAR GATVRPGIRI EIYAANRRNP FLPFVGLDLW
SAPLLKRRKI ALFWAALALW ERLGLGRSQW RNGGQVRAGD PVLSEP
|
|---|
| |