Gene Syncc9605_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0888 
Symbol 
ID3736357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp858841 
End bp859743 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content64% 
IMG OID637775488 
Producthypothetical protein 
Protein accessionYP_381211 
Protein GI78212432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.475505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCGC TGCTGACGCG CACCAAGAGC TTTCGGGACC CATGGGTCGG TCACCCAGAT 
CTGAACCGAC GCTGGCAGCT GCATCGACGC CGGGTTCAGC TGGCGGAGAC GCTGTGCCTC
TGGAGGCGGC TGCTGCGACC AACTCAGCTG GCCAGCCTGG AGGGGGATGG CTTTGTGGTG
CTCGAGAACT TTCTGCCGCA GCCGGAGTTT GAGGCCTTGC GCGATGAGGT GGAGACCGTG
GTGGCTCGCG CCTCACGCCT GCATCCGGCA CCGGACAACA ACATGCCTGG TTTTCGCCCC
AAACAACCCT TCCCCGGGGG TTTTGATCGT TTCGATGGAG GAACCCTCAA CCGCTTTCTG
CACATCGACC CCGAGCAGAT GCCTCGGGCC ACTGCCTTCT CCCATGACCA TAGGCTCAGT
GCGGGATCGC GCCAGGTCAT CGGCTTGCCG ATGAATCCGC GCAAGCTGGA CATCTACCTC
ACGGCTCACG GCGAGGAGGC CCGCACGCCC GATCTGCAGA AGGTGCTGCA TCGCGACACG
TTCTTCCGAG CTCTGAAGTT CTGGTTCTTT CTGCGGCCGG TGCAACCCCA GGACGGTCCC
TTCGAATACG TGCCGGGCAG CCATCGTCTC GATCCATCCC GCCTGCGGTG GGAGCAGACC
ACAGCCGTTG CAGCTGCAGA ACAACGGCGG CAGCCGGATG TGTCTGGATC GTTCCGCATT
CGCGAAGAGT CCTTGGCCGA ACTGGGTCTG CCCAGGCCTG TTGCCCTCAC CTGCCCTGCC
AACACCCTGG TGCTGGCGGA CGTGTTCGGC TTTCACCGGC GCGGTGCCGC CGCCCAGGGG
CAGCAGCGGT TAGCGCTTTA CGGCTGGAAC CGCCCTTATC CCTTCCTCCC TATCAGCTGG
TGA
 
Protein sequence
MLSLLTRTKS FRDPWVGHPD LNRRWQLHRR RVQLAETLCL WRRLLRPTQL ASLEGDGFVV 
LENFLPQPEF EALRDEVETV VARASRLHPA PDNNMPGFRP KQPFPGGFDR FDGGTLNRFL
HIDPEQMPRA TAFSHDHRLS AGSRQVIGLP MNPRKLDIYL TAHGEEARTP DLQKVLHRDT
FFRALKFWFF LRPVQPQDGP FEYVPGSHRL DPSRLRWEQT TAVAAAEQRR QPDVSGSFRI
REESLAELGL PRPVALTCPA NTLVLADVFG FHRRGAAAQG QQRLALYGWN RPYPFLPISW