16 homologs were found in PanDaTox collection
for query gene Mnod_8686 on replicon NC_011892
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011892  Mnod_8686  phytanoyl-CoA dioxygenase  100 
 
 
354 aa  711    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1940  phytanoyl-CoA dioxygenase  96.6 
 
 
355 aa  667    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0322  phytanoyl-CoA dioxygenase  88.05 
 
 
355 aa  615  1e-175  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6410  Phytanoyl-CoA dioxygenase  53.2 
 
 
326 aa  277  2e-73  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8688  Phytanoyl-CoA dioxygenase  52.86 
 
 
326 aa  276  3e-73  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3963  phytanoyl-CoA dioxygenase  47.76 
 
 
341 aa  272  5.000000000000001e-72  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.362258 
 
 
-
 
NC_011894  Mnod_3760  Phytanoyl-CoA dioxygenase  46.48 
 
 
346 aa  269  7e-71  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8687  Phytanoyl-CoA dioxygenase  45.51 
 
 
346 aa  265  1e-69  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3918  phytanoyl-CoA dioxygenase  46.61 
 
 
347 aa  264  2e-69  Pseudomonas putida F1  Bacteria  normal  0.117888  normal 
 
 
-
 
NC_010511  M446_1911  phytanoyl-CoA dioxygenase  45.45 
 
 
456 aa  250  3e-65  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0015  phytanoyl-CoA dioxygenase  46.76 
 
 
346 aa  247  3e-64  Methylobacterium sp. 4-46  Bacteria  normal  0.349617  normal  0.130137 
 
 
-
 
NC_011365  Gdia_1839  Phytanoyl-CoA dioxygenase  42.69 
 
 
383 aa  229  5e-59  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5428  Phytanoyl-CoA dioxygenase  42.25 
 
 
339 aa  228  1e-58  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0395279 
 
 
-
 
NC_007513  Syncc9902_1510  hypothetical protein  35.4 
 
 
317 aa  152  1e-35  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0888  hypothetical protein  36.82 
 
 
300 aa  146  6e-34  Synechococcus sp. CC9605  Bacteria  normal  0.475505  normal 
 
 
-
 
NC_013440  Hoch_4572  phytanoyl-CoA dioxygenase  34.87 
 
 
321 aa  144  3e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
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