Gene Dfer_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1903 
Symbol 
ID8225474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2339555 
End bp2340319 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content53% 
IMG OID644929750 
ProductPhytanoyl-CoA dioxygenase 
Protein accessionYP_003086302 
Protein GI255035681 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.825715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTG GATTGATCAA AAGAAAATTT GAGGAAGATG GCTATGTTTT TTTGCCCGGA 
TTCCTTTCAG ATCGGGAAGT GGCGGAAGTG AACCGCAGAC TGGAAGATTT TATTGAAAAC
ACGGTTCCCG GACTTCCTCC GAACGATGTC TTTTATGAAG ATAAGAACGA TCCCGCCACG
TTAAAGCAGA TTATGCACGT GTCTGAACAC GCGCCCTATT TCGCGCCTAT GCTGAATGAC
AGTAAGTTCA GCAGGATCGC AGGGGAGCTG CTGCAAGACA CCGTAGTGCC GAAGATTCTG
GAGTATTTTA ACAAACCCCC GAAAATTGGA AAGCCTACCC CTCCGCACCA GGACGGCTAC
TACTTCATGC TCAAACCCGC CAAGGCGGTG ACGATGTGGA TGGCGCTGGA AGACGTGGAC
GAGGCCAACG GATGTGTGCG TTACGTACGG GGATCTCATA AATTGGGAAT GCGCCGGCAC
GGAAGAACAC AAACCCTCGG TTTCTCACAG GGAATCACGG ATTTCGGCTT GCCGGAGGAT
CTTGAAAATG AGATCGCATT CCCCGCCAGA GCGGGCGACC TGCTGATCCA TGACTCGCTG
ACCATCCACC GCGCCGACGG GAATCAGACT GCCGACCGTA CACGGAAGGC GCTGGGGTTT
ATCTATTTCG GTGCGTCGGC GCAGGAAGAC GTAGAGGCCA AAGCGGCCTA TCAGGCACAA
TTGCGGCAGG AAATGCGCGA AAGAGACGAG TTGGTGGCAG AGTGA
 
Protein sequence
MDFGLIKRKF EEDGYVFLPG FLSDREVAEV NRRLEDFIEN TVPGLPPNDV FYEDKNDPAT 
LKQIMHVSEH APYFAPMLND SKFSRIAGEL LQDTVVPKIL EYFNKPPKIG KPTPPHQDGY
YFMLKPAKAV TMWMALEDVD EANGCVRYVR GSHKLGMRRH GRTQTLGFSQ GITDFGLPED
LENEIAFPAR AGDLLIHDSL TIHRADGNQT ADRTRKALGF IYFGASAQED VEAKAAYQAQ
LRQEMRERDE LVAE