216 homologs were found in PanDaTox collection
for query gene Rpal_2057 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_2057  transcriptional regulator, MucR family  100 
 
 
138 aa  283  5e-76  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1940  MucR family transcriptional regulator  89.13 
 
 
138 aa  253  5e-67  Rhodopseudomonas palustris BisB5  Bacteria  decreased coverage  0.00262472  normal  0.275978 
 
 
-
 
NC_007778  RPB_3519  MucR family transcriptional regulator  86.13 
 
 
139 aa  245  1e-64  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.409098  normal  0.722255 
 
 
-
 
NC_007964  Nham_2627  MucR family transcriptional regulator  82.61 
 
 
137 aa  236  1e-61  Nitrobacter hamburgensis X14  Bacteria  normal  0.337964  n/a   
 
 
-
 
NC_007406  Nwi_2227  ROSMUCR transcriptional regulator  79.71 
 
 
137 aa  230  6e-60  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  0.0000658566  normal 
 
 
-
 
NC_009485  BBta_3042  MucR family transcriptional regulator  76.81 
 
 
138 aa  221  3e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1774  MucR family transcriptional regulator  74.45 
 
 
138 aa  206  1e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.257701  normal  0.0107118 
 
 
-
 
NC_009720  Xaut_2842  MucR family transcriptional regulator  70.68 
 
 
139 aa  198  1.9999999999999998e-50  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.840232 
 
 
-
 
NC_010581  Bind_1642  MucR family transcriptional regulator  67.63 
 
 
138 aa  193  6e-49  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.326969  normal  0.30355 
 
 
-
 
NC_011666  Msil_1673  transcriptional regulator, MucR family  68.84 
 
 
137 aa  192  2e-48  Methylocella silvestris BL2  Bacteria  n/a    normal  0.233018 
 
 
-
 
NC_009720  Xaut_1838  MucR family transcriptional regulator  65.19 
 
 
155 aa  181  3e-45  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0743894  normal  0.315346 
 
 
-
 
NC_010505  Mrad2831_3912  MucR family transcriptional regulator  62.02 
 
 
137 aa  175  2e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.913011  normal  0.1317 
 
 
-
 
NC_010725  Mpop_0503  transcriptional regulator, MucR family  59.56 
 
 
145 aa  171  3.9999999999999995e-42  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0293653 
 
 
-
 
NC_009720  Xaut_2239  MucR family transcriptional regulator  62.5 
 
 
154 aa  170  5e-42  Xanthobacter autotrophicus Py2  Bacteria  normal  0.247755  normal  0.0103363 
 
 
-
 
NC_009719  Plav_0871  MucR family transcriptional regulator  66.15 
 
 
138 aa  170  5.999999999999999e-42  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3766  MucR family transcriptional regulator  62.31 
 
 
140 aa  169  1e-41  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0432  ROSMUCR transcriptional regulator  59.56 
 
 
145 aa  169  2e-41  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1357  MucR family transcriptional regulator  61.42 
 
 
141 aa  168  2e-41  Caulobacter sp. K31  Bacteria  normal  0.067604  normal 
 
 
-
 
NC_011757  Mchl_0466  transcriptional regulator, MucR family  59.56 
 
 
145 aa  169  2e-41  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.138143 
 
 
-
 
NC_008254  Meso_0871  MucR family transcriptional regulator  65.08 
 
 
156 aa  166  8e-41  Chelativorans sp. BNC1  Bacteria  normal  0.0229033  n/a   
 
 
-
 
NC_009511  Swit_2384  MucR family transcriptional regulator  57.55 
 
 
137 aa  164  4e-40  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4422  MucR family transcriptional regulator  63.41 
 
 
145 aa  164  4e-40  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.705801 
 
 
-
 
NC_011894  Mnod_4157  transcriptional regulator, MucR family  62.3 
 
 
141 aa  161  4.0000000000000004e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.157923  n/a   
 
 
-
 
NC_011757  Mchl_5240  transcriptional regulator, MucR family  54.74 
 
 
175 aa  160  5.0000000000000005e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.672182 
 
 
-
 
NC_010172  Mext_4773  ROSMUCR transcriptional regulator  54.74 
 
 
175 aa  160  8.000000000000001e-39  Methylobacterium extorquens PA1  Bacteria  normal  0.494992  normal 
 
 
-
 
NC_008783  BARBAKC583_0423  Ros/MucR family transcriptional regulator  58.14 
 
 
143 aa  159  1e-38  Bartonella bacilliformis KC583  Bacteria  normal  0.970108  n/a   
 
 
-
 
NC_009636  Smed_0614  MucR family transcriptional regulator  57.46 
 
 
143 aa  159  1e-38  Sinorhizobium medicae WSM419  Bacteria  normal  0.405846  normal 
 
 
-
 
NC_011365  Gdia_3197  transcriptional regulator, MucR family  60.32 
 
 
158 aa  159  1e-38  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.345502  normal 
 
 
-
 
NC_010725  Mpop_5315  transcriptional regulator, MucR family  52.94 
 
 
171 aa  159  2e-38  Methylobacterium populi BJ001  Bacteria  normal  0.160957  normal  0.979168 
 
 
-
 
NC_011894  Mnod_7194  transcriptional regulator, MucR family  57.75 
 
 
145 aa  158  2e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6025  MucR family transcriptional regulator  59.52 
 
 
148 aa  158  3e-38  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0116577 
 
 
-
 
NC_010511  M446_1890  MucR family transcriptional regulator  60.32 
 
 
143 aa  157  3e-38  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_2690  MucR family transcriptional regulator  58.78 
 
 
142 aa  157  4e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0569  Ros/MucR family transcriptional regulator  57.58 
 
 
142 aa  157  6e-38  Brucella suis 1330  Bacteria  normal  0.402998  n/a   
 
 
-
 
NC_009505  BOV_0570  Ros/MucR family transcriptional regulator  57.58 
 
 
161 aa  156  8e-38  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009507  Swit_5207  MucR family transcriptional regulator  54.81 
 
 
183 aa  155  2e-37  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.240071 
 
 
-
 
NC_009621  Smed_6057  MucR family transcriptional regulator  58.87 
 
 
151 aa  155  2e-37  Sinorhizobium medicae WSM419  Bacteria  normal  0.320123  normal 
 
 
-
 
NC_011894  Mnod_6579  transcriptional regulator, MucR family  60.61 
 
 
166 aa  155  2e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5993  MucR family transcriptional regulator  58.87 
 
 
149 aa  154  3e-37  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0950336 
 
 
-
 
NC_010511  M446_6742  MucR family transcriptional regulator  57.14 
 
 
143 aa  152  1e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0991744 
 
 
-
 
NC_011369  Rleg2_0881  transcriptional regulator, MucR family  58.27 
 
 
143 aa  151  2e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.000502539  normal 
 
 
-
 
NC_007643  Rru_A1829  MucR family transcriptional regulator  60.48 
 
 
139 aa  152  2e-36  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1007  transcriptional regulator, MucR family  58.27 
 
 
143 aa  152  2e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.00000996062  normal 
 
 
-
 
NC_011894  Mnod_7625  transcriptional regulator, MucR family  60.45 
 
 
166 aa  150  8e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5563  MucR family transcriptional regulator  55.3 
 
 
143 aa  150  8e-36  Methylobacterium sp. 4-46  Bacteria  normal  0.550782  normal 
 
 
-
 
NC_009719  Plav_2907  MucR family transcriptional regulator  56.1 
 
 
168 aa  148  3e-35  Parvibaculum lavamentivorans DS-1  Bacteria  hitchhiker  0.000783071  hitchhiker  0.00150046 
 
 
-
 
NC_011989  Avi_1277  transcriptional regulator  58.14 
 
 
143 aa  148  3e-35  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009622  Smed_6371  MucR family transcriptional regulator  54.4 
 
 
137 aa  147  4e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_2100  transcriptional regulator, MucR family  52.59 
 
 
134 aa  147  4e-35  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3684  transcriptional regulator, MucR family  58.4 
 
 
162 aa  147  6e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6899  MucR family transcriptional regulator  57.04 
 
 
164 aa  146  1.0000000000000001e-34  Methylobacterium sp. 4-46  Bacteria  normal  0.106465  normal 
 
 
-
 
NC_011894  Mnod_7402  transcriptional regulator, MucR family  57.6 
 
 
133 aa  145  1.0000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.169134  n/a   
 
 
-
 
NC_010511  M446_6603  MucR family transcriptional regulator  56.92 
 
 
171 aa  145  2.0000000000000003e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.108608 
 
 
-
 
NC_010338  Caul_3048  MucR family transcriptional regulator  57.03 
 
 
143 aa  145  2.0000000000000003e-34  Caulobacter sp. K31  Bacteria  normal  0.340633  normal 
 
 
-
 
NC_010511  M446_6580  MucR family transcriptional regulator  56.69 
 
 
133 aa  144  3e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0358165 
 
 
-
 
NC_011894  Mnod_6541  transcriptional regulator, MucR family  59.2 
 
 
144 aa  144  4.0000000000000006e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5932  MucR family transcriptional regulator  60 
 
 
145 aa  144  5e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.54766 
 
 
-
 
NC_010511  M446_4730  MucR family transcriptional regulator  57.81 
 
 
145 aa  143  8.000000000000001e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011892  Mnod_8754  transcriptional regulator, MucR family  56.52 
 
 
143 aa  143  1e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.17166  n/a   
 
 
-
 
NC_009507  Swit_5269  transcriptional regulator  55.65 
 
 
159 aa  142  1e-33  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.898275 
 
 
-
 
NC_011894  Mnod_2474  transcriptional regulator, MucR family  54.01 
 
 
168 aa  142  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011887  Mnod_8232  transcriptional regulator, MucR family  54.68 
 
 
150 aa  142  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0643273  n/a   
 
 
-
 
NC_010511  M446_6298  MucR family transcriptional regulator  52.59 
 
 
142 aa  141  3e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0539112 
 
 
-
 
NC_008048  Sala_2067  MucR family transcriptional regulator  57.02 
 
 
144 aa  140  5e-33  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.587924  normal  0.315987 
 
 
-
 
NC_011894  Mnod_1808  transcriptional regulator, MucR family  57.48 
 
 
160 aa  140  5e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6739  MucR family transcriptional regulator  54.81 
 
 
164 aa  140  6e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.055135 
 
 
-
 
NC_008347  Mmar10_1538  MucR family transcriptional regulator  46.62 
 
 
140 aa  139  9e-33  Maricaulis maris MCS10  Bacteria  normal  0.0321201  normal 
 
 
-
 
NC_011894  Mnod_3011  transcriptional regulator, MucR family  51.47 
 
 
173 aa  139  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0549  transcriptional regulator, MucR family  51.82 
 
 
147 aa  139  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.973698  n/a   
 
 
-
 
NC_011894  Mnod_2091  transcriptional regulator, MucR family  54.62 
 
 
162 aa  139  9.999999999999999e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6164  MucR family transcriptional regulator  55.73 
 
 
174 aa  139  1.9999999999999998e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011367  Gdia_3574  transcriptional regulator, MucR family  58.54 
 
 
185 aa  138  1.9999999999999998e-32  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0283517  n/a   
 
 
-
 
NC_010511  M446_4116  MucR family transcriptional regulator  57.69 
 
 
140 aa  139  1.9999999999999998e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.147804 
 
 
-
 
NC_011757  Mchl_4938  transcriptional regulator, MucR family  50 
 
 
176 aa  138  3e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.686756  normal  0.493177 
 
 
-
 
NC_010172  Mext_4474  ROSMUCR transcriptional regulator  50 
 
 
176 aa  138  3e-32  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5073  transcriptional regulator, MucR family  59.35 
 
 
139 aa  138  3e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2620  transcriptional regulator, MucR family  53.62 
 
 
140 aa  137  3e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.297322  n/a   
 
 
-
 
NC_010511  M446_1006  MucR family transcriptional regulator  51.45 
 
 
144 aa  137  3.9999999999999997e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4988  transcriptional regulator, MucR family  50.78 
 
 
177 aa  137  4.999999999999999e-32  Methylobacterium populi BJ001  Bacteria  normal  0.103901  normal  0.173335 
 
 
-
 
NC_011892  Mnod_8753  transcriptional regulator, MucR family  55.22 
 
 
175 aa  137  6e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.286217  n/a   
 
 
-
 
NC_009511  Swit_1802  MucR family transcriptional regulator  51.2 
 
 
148 aa  137  6e-32  Sphingomonas wittichii RW1  Bacteria  normal  0.333546  normal 
 
 
-
 
NC_011894  Mnod_3504  transcriptional regulator, MucR family  56.72 
 
 
131 aa  137  6e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3559  transcriptional regulator, MucR family  53.57 
 
 
144 aa  137  6e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0075  MucR family transcriptional regulator  49.3 
 
 
166 aa  137  7e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4253  transcriptional regulator, MucR family  56.92 
 
 
147 aa  136  7.999999999999999e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2484  transcriptional regulator, MucR family  55.64 
 
 
134 aa  136  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.281768  n/a   
 
 
-
 
NC_011894  Mnod_3845  transcriptional regulator, MucR family  56.06 
 
 
135 aa  135  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.581929  n/a   
 
 
-
 
NC_010511  M446_3346  MucR family transcriptional regulator  51.09 
 
 
163 aa  136  1e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2999  transcriptional regulator, MucR family  54.26 
 
 
134 aa  135  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0065  MucR family transcriptional regulator  54.4 
 
 
133 aa  135  2e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.126654  normal  0.420331 
 
 
-
 
NC_010511  M446_1029  MucR family transcriptional regulator  51.52 
 
 
146 aa  135  2e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5488  MucR family transcriptional regulator  54.69 
 
 
158 aa  134  3.0000000000000003e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.622801  normal  0.0617685 
 
 
-
 
NC_011894  Mnod_1559  transcriptional regulator, MucR family  54.92 
 
 
164 aa  134  3.0000000000000003e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.192096  n/a   
 
 
-
 
NC_011894  Mnod_4973  transcriptional regulator, MucR family  53.66 
 
 
160 aa  134  4e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0985  MucR family transcriptional regulator  51.85 
 
 
145 aa  134  5e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.933762  n/a   
 
 
-
 
NC_010511  M446_1153  MucR family transcriptional regulator  52.67 
 
 
174 aa  134  6.0000000000000005e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.877039  normal 
 
 
-
 
NC_011894  Mnod_4087  transcriptional regulator, MucR family  52.55 
 
 
141 aa  133  7.000000000000001e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.242362  n/a   
 
 
-
 
NC_011894  Mnod_5627  transcriptional regulator, MucR family  53.49 
 
 
174 aa  133  9e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.698408  n/a   
 
 
-
 
NC_010505  Mrad2831_4669  MucR family transcriptional regulator  52.27 
 
 
169 aa  132  9.999999999999999e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_7826  transcriptional regulator, MucR family  49.24 
 
 
174 aa  132  9.999999999999999e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
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